Detailed information NTG0323857

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: CNQ82_RS07985
• Genome accession: NZ_CP033460
• Coordinates: 1687788..1690196 (-)
• Length: 802 a.a.
• NCBI ID: WP_123144844.1
• Uniprot ID: -
• Organism: Staphylococcus debuckii strain SDB 2975
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1682788..1695196

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CNQ82_RS07960 (CNQ82_07960)	-	1682817..1683458 (-)	642	WP_123144841.1	O-methyltransferase	-
CNQ82_RS07965 (CNQ82_07965)	-	1683757..1684068 (-)	312	WP_123144842.1	DUF1292 domain-containing protein	-
CNQ82_RS07970 (CNQ82_07970)	ruvX	1684091..1684519 (-)	429	WP_095104917.1	Holliday junction resolvase RuvX	-
CNQ82_RS07975 (CNQ82_07975)	-	1684523..1684786 (-)	264	WP_095104915.1	IreB family regulatory phosphoprotein	-
CNQ82_RS07980 (CNQ82_07980)	alaS	1684855..1687485 (-)	2631	WP_123144843.1	alanine--tRNA ligase	-
CNQ82_RS07985 (CNQ82_07985)	recD2	1687788..1690196 (-)	2409	WP_123144844.1	ATP-dependent RecD-like DNA helicase	Machinery gene
CNQ82_RS07990 (CNQ82_07990)	-	1690200..1690868 (-)	669	WP_123144845.1	tetratricopeptide repeat protein	-
CNQ82_RS07995 (CNQ82_07995)	mnmA	1690975..1692087 (-)	1113	WP_123144846.1	tRNA 2-thiouridine(34) synthase MnmA	-
CNQ82_RS08000 (CNQ82_08000)	-	1692090..1693229 (-)	1140	WP_123144847.1	cysteine desulfurase family protein	-
CNQ82_RS08005 (CNQ82_08005)	-	1693411..1694409 (+)	999	WP_123144848.1	LLM class flavin-dependent oxidoreductase	-
CNQ82_RS08010 (CNQ82_08010)	-	1694444..1694650 (-)	207	WP_123144849.1	CsbD family protein	-
CNQ82_RS13140	-	1694712..1694885 (-)	174	WP_164711956.1	hypothetical protein	-

Sequence

Protein

• Length: 802 a.a.
• Molecular weight: 90476.85 Da
• Isoelectric Point: 4.5050

>NTDB_id=323857 CNQ82_RS07985 WP_123144844.1 1687788..1690196(-) (recD2) [Staphylococcus debuckii strain SDB 2975]
MSNPTLFDYSMVKGTVEAILFQNKENFYTVLKVDPIETNEEFDSMPTIVGFFPEIAEGDVYTFKGQAVTHPKYGKQLKAE
TFEKELPQTKDAIVSYLSSDLFKGIGKKTAENIVATLGENTINKILDNEEALAEVPHLSKKKQKQIAEQIYSNQEVEKIM
IRLHDLGFGPKLSMNIYQVYQVETLSEIEKNPYQLVYDVKGVGFNKADTLAKNLGIEYNDPERLKAGLLYTIEEECIKQG
HTYLPKDYVIEASQDTLSQVHSESIDTKLLEEMILQLTEEEKLVEADETLSVPSLYYSEVKSVQNLYRIEAHQTKLETIE
QSDLQMHIGEIEDMNKVNYAASQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYNEDDYPIALA
APTGRAAKRLQESTGLEAMTIHRLIGWSQETKPEDVLENEINAKLIIIDEMSMVDTWLFHQFLNAVPIDAQVILVGDEDQ
LPSVGPGQVFKDLIDSKVISRVNLTEVYRQQDGSSIIELAHKMKLGQPIDITQRFHDRSFIPCSADQIPDVVNKVVTSAV
KKGYDMSDIQVLAPMYRGSAGIKRLNKVLQDILNPKEEDTREIEFGDVVFRKGDKVLQLVNRPNDNIFNGDIGVIQGIFW
AKENELNKDVLVVDFEGNEITFTKQDMMELTHAYCTSIHKAQGSEFPIVIMPVVKQYYRMLQRPIIYTGLTRAKQSLVFL
GDSQAFDIGMQTYGQVRMTRMAQLLRDYFGMETSSSETEETHSTSTAEQNTKVIELSEATIFQIDPMIGMGDVTPYSFAT
EK

Nucleotide

• Length: 2409 bp

>NTDB_id=323857 CNQ82_RS07985 WP_123144844.1 1687788..1690196(-) (recD2) [Staphylococcus debuckii strain SDB 2975]
TTGAGCAACCCTACATTATTTGATTACTCTATGGTCAAAGGTACGGTCGAAGCCATTCTTTTTCAAAATAAAGAAAACTT
CTATACTGTGCTGAAAGTAGATCCTATTGAAACGAATGAAGAATTTGATAGTATGCCGACAATTGTAGGGTTCTTTCCTG
AAATTGCAGAAGGTGATGTGTATACCTTCAAAGGACAAGCGGTTACACACCCGAAGTATGGCAAACAGTTGAAAGCAGAA
ACCTTTGAAAAAGAATTACCGCAAACAAAAGATGCCATTGTCAGTTATTTGTCTAGTGATTTATTTAAAGGTATCGGAAA
GAAAACAGCAGAAAATATTGTCGCTACACTTGGCGAAAACACGATTAATAAAATTTTGGATAACGAAGAAGCTTTGGCTG
AAGTCCCACATTTATCTAAGAAAAAGCAAAAACAAATTGCCGAACAAATCTATAGTAACCAAGAAGTAGAAAAGATTATG
ATTCGACTGCATGATTTAGGTTTCGGTCCTAAATTATCTATGAATATTTATCAGGTCTATCAAGTAGAGACATTATCGGA
AATTGAAAAGAATCCATATCAGCTGGTCTATGATGTGAAAGGTGTCGGTTTTAATAAAGCTGACACTTTGGCTAAAAATC
TTGGAATAGAATACAATGACCCCGAGCGTTTGAAAGCTGGTTTGTTATATACCATTGAGGAAGAATGCATTAAACAAGGC
CACACTTATTTGCCGAAAGATTATGTTATAGAAGCTTCTCAAGACACGTTATCTCAAGTACATAGCGAATCCATTGATAC
TAAATTGTTGGAAGAGATGATTTTGCAACTGACAGAGGAAGAGAAGCTGGTGGAAGCGGATGAAACCCTTTCTGTTCCAA
GTTTATATTATTCCGAAGTGAAAAGTGTACAGAATTTATATCGTATAGAAGCACATCAAACCAAATTAGAAACTATCGAG
CAATCAGACTTGCAGATGCATATCGGTGAAATTGAAGATATGAATAAAGTGAATTATGCCGCTTCGCAAAAGGAAGCCTT
AGAGACTGCAATCAATTCAAAAGTGATGTTGCTGACTGGCGGCCCAGGAACAGGGAAAACTACGGTTATTAAAGGAATTG
TAGAACTTTATGCTGAAATTCACGGTTTATCGCTTGATTATGACGACTACAATGAGGACGATTATCCTATCGCTTTAGCA
GCGCCTACAGGACGTGCTGCTAAAAGATTGCAAGAATCTACCGGTTTAGAAGCCATGACGATTCATCGTTTGATTGGGTG
GAGTCAAGAAACGAAACCAGAAGATGTTTTAGAAAATGAAATTAATGCTAAGCTGATTATTATTGATGAAATGTCGATGG
TAGATACTTGGTTATTCCATCAATTTCTAAATGCCGTACCGATTGATGCGCAAGTTATCCTCGTGGGTGATGAAGACCAA
TTACCTTCTGTAGGCCCAGGACAAGTATTTAAGGATTTGATTGATTCTAAAGTGATATCACGTGTGAATTTGACCGAAGT
TTATCGGCAACAAGATGGTTCAAGCATTATTGAATTAGCGCATAAAATGAAATTAGGACAACCAATTGATATTACTCAAC
GCTTCCATGATCGCAGTTTCATCCCATGCAGTGCCGATCAGATCCCTGATGTCGTTAATAAAGTAGTGACTTCCGCTGTT
AAAAAAGGATATGATATGAGCGATATACAGGTGCTAGCGCCTATGTATAGAGGAAGCGCAGGTATTAAACGCTTAAATAA
AGTACTTCAAGATATCTTGAATCCTAAAGAAGAAGATACCCGAGAAATAGAATTTGGCGATGTTGTTTTTCGAAAAGGCG
ATAAAGTACTACAACTAGTGAACCGTCCGAATGATAATATCTTCAATGGTGATATCGGAGTTATTCAAGGTATTTTCTGG
GCAAAAGAAAATGAATTAAATAAAGACGTATTAGTAGTGGATTTTGAAGGCAATGAGATTACTTTTACGAAACAAGACAT
GATGGAATTGACGCATGCCTACTGTACTTCAATTCATAAAGCACAAGGTTCAGAGTTTCCAATCGTGATTATGCCGGTTG
TTAAACAGTATTATCGAATGCTGCAACGACCGATTATCTATACAGGATTGACTCGCGCAAAACAATCATTAGTCTTTTTA
GGAGACAGCCAAGCCTTTGATATTGGCATGCAAACGTACGGACAGGTGCGTATGACCCGCATGGCACAACTACTGCGTGA
TTATTTCGGTATGGAAACATCGTCAAGTGAAACTGAAGAGACCCATTCAACTTCAACTGCAGAACAAAATACTAAAGTCA
TCGAACTGTCAGAAGCTACTATTTTCCAAATCGATCCGATGATTGGAATGGGCGATGTTACACCTTATAGTTTTGCGACT
GAAAAATAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• AAA domain (AAA_30) (339-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50.873	100	0.509