Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   FHI56_RS06850 Genome accession   NZ_CP040804
Coordinates   1149821..1150303 (+) Length   160 a.a.
NCBI ID   WP_149561302.1    Uniprot ID   -
Organism   Streptococcus salivarius strain LAB813     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1144821..1155303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FHI56_RS06830 (FHI56_06830) prfB 1145316..1146414 (+) 1099 WP_096833329.1 peptide chain release factor 2 -
  FHI56_RS06835 (FHI56_06835) ftsE 1146492..1147184 (+) 693 WP_002885005.1 cell division ATP-binding protein FtsE -
  FHI56_RS06840 (FHI56_06840) ftsX 1147177..1148106 (+) 930 WP_118058331.1 permease-like cell division protein FtsX -
  FHI56_RS06845 (FHI56_06845) - 1148236..1149852 (+) 1617 WP_149561301.1 IS1182 family transposase -
  FHI56_RS06850 (FHI56_06850) mutX 1149821..1150303 (+) 483 WP_149561302.1 8-oxo-dGTP diphosphatase Machinery gene
  FHI56_RS06855 (FHI56_06855) - 1150313..1151491 (+) 1179 WP_004182599.1 AI-2E family transporter -
  FHI56_RS06860 (FHI56_06860) - 1151481..1152710 (+) 1230 WP_004182598.1 tetratricopeptide repeat protein -
  FHI56_RS06865 (FHI56_06865) lepB 1152832..1153389 (+) 558 WP_013990669.1 signal peptidase I -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18779.13 Da        Isoelectric Point: 4.4374

>NTDB_id=323581 FHI56_RS06850 WP_149561302.1 1149821..1150303(+) (mutX) [Streptococcus salivarius strain LAB813]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREILEETHFTVTDMDFKGMITFPEFTPGH
DWYTYVFKVTGFEGELISDEESREGTLEWVPYDEVLSKPTWEGDYEIFKWILEDKPFFSAKFVYDRNQNLVDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=323581 FHI56_RS06850 WP_149561302.1 1149821..1150303(+) (mutX) [Streptococcus salivarius strain LAB813]
ATGACAAAGTTAGCTACTATTTGTTATATTGACAATGGAAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTCTCGAGGAAACCCATTTTACAGTGACTGATATGGATTTTAAAGGGATGATTACCTTTCCAGAATTTACCCCCGGTCAT
GATTGGTATACCTATGTCTTTAAGGTAACTGGTTTTGAAGGAGAACTCATCTCAGATGAGGAGTCTCGTGAAGGAACGCT
TGAATGGGTACCTTATGATGAGGTCTTATCTAAACCAACTTGGGAAGGTGACTACGAGATCTTCAAGTGGATTCTTGAAG
ATAAGCCTTTCTTCTCTGCAAAATTTGTCTATGATCGTAACCAAAACTTAGTAGACAAGACTGTAACCTTTTATGATAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

72.956

99.375

0.725