Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | D5285_RS10430 | Genome accession | NZ_CP033389 |
| Coordinates | 2028624..2029052 (+) | Length | 142 a.a. |
| NCBI ID | WP_020451590.1 | Uniprot ID | A0A6N2GRD1 |
| Organism | Bacillus paralicheniformis strain CBMAI 1303 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 2023624..2034052
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5285_RS10405 (D5285_10405) | - | 2023880..2024488 (+) | 609 | WP_020451585.1 | flavin reductase family protein | - |
| D5285_RS10410 (D5285_10410) | wrbA | 2024690..2025304 (+) | 615 | WP_020451586.1 | NAD(P)H:quinone oxidoreductase | - |
| D5285_RS22960 | - | 2025615..2025755 (+) | 141 | WP_023857597.1 | hypothetical protein | - |
| D5285_RS10415 (D5285_10415) | - | 2025748..2026581 (+) | 834 | WP_020451587.1 | prohibitin family protein | - |
| D5285_RS10420 (D5285_10420) | - | 2026670..2027431 (+) | 762 | WP_041817207.1 | hypothetical protein | - |
| D5285_RS10425 (D5285_10425) | - | 2027491..2028330 (+) | 840 | WP_026579651.1 | thymidylate synthase | - |
| D5285_RS10430 (D5285_10430) | nucA/comI | 2028624..2029052 (+) | 429 | WP_020451590.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| D5285_RS10440 (D5285_10440) | lexA | 2029251..2029874 (-) | 624 | WP_020451591.1 | transcriptional repressor LexA | - |
| D5285_RS10445 (D5285_10445) | yneA | 2030026..2030337 (+) | 312 | WP_020451592.1 | cell division suppressor protein YneA | - |
| D5285_RS10450 (D5285_10450) | - | 2030356..2031003 (+) | 648 | WP_020451593.1 | recombinase family protein | - |
| D5285_RS10455 (D5285_10455) | - | 2031069..2031302 (+) | 234 | WP_020451594.1 | DUF896 domain-containing protein | - |
| D5285_RS10460 (D5285_10460) | tkt | 2031466..2033469 (+) | 2004 | WP_020451595.1 | transketolase | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15420.36 Da Isoelectric Point: 7.8950
>NTDB_id=323564 D5285_RS10430 WP_020451590.1 2028624..2029052(+) (nucA/comI) [Bacillus paralicheniformis strain CBMAI 1303]
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDVLYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSDYADGTRILFIVR
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDVLYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSDYADGTRILFIVR
Nucleotide
Download Length: 429 bp
>NTDB_id=323564 D5285_RS10430 WP_020451590.1 2028624..2029052(+) (nucA/comI) [Bacillus paralicheniformis strain CBMAI 1303]
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTGCTGCTTGGGCTTTCGGGAGGGGCTGCATATTCTCC
TCAGCATGCCGAAGGCGCTGCAAGGTATGATGACGTATTGTATTTTCCGGCATCGCGCTATCCTGAAACAGGTGCTCATA
TAAGCGATGCGATCAAAGCGGGCCATTCAGATGTCTGCACAATTGAAAGATCTGGAGCGGATAAGCGCCGTCAGGAATCA
TTAAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGAAAAGGAGC
GTCGGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGATTACGCTGACG
GGACGAGAATTTTGTTTATCGTTCGATAA
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTGCTGCTTGGGCTTTCGGGAGGGGCTGCATATTCTCC
TCAGCATGCCGAAGGCGCTGCAAGGTATGATGACGTATTGTATTTTCCGGCATCGCGCTATCCTGAAACAGGTGCTCATA
TAAGCGATGCGATCAAAGCGGGCCATTCAGATGTCTGCACAATTGAAAGATCTGGAGCGGATAAGCGCCGTCAGGAATCA
TTAAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGAAAAGGAGC
GTCGGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGATTACGCTGACG
GGACGAGAATTTTGTTTATCGTTCGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
59.524 |
88.732 |
0.528 |