Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   SMUNN2025_RS00205 Genome accession   NC_013928
Coordinates   28616..29371 (+) Length   251 a.a.
NCBI ID   WP_002275350.1    Uniprot ID   -
Organism   Streptococcus mutans NN2025     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 23616..34371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNN2025_RS00185 (SmuNN2025_0017) mreD 24358..24864 (+) 507 WP_012997494.1 rod shape-determining protein MreD -
  SMUNN2025_RS00190 (SmuNN2025_0018) gbpB 24974..26269 (+) 1296 WP_002264119.1 glucan-binding protein GbpB -
  SMUNN2025_RS00195 (SmuNN2025_0019) - 26394..27362 (+) 969 WP_002277784.1 ribose-phosphate diphosphokinase -
  SMUNN2025_RS00200 (SmuNN2025_0020) - 27451..28626 (+) 1176 WP_002277785.1 pyridoxal phosphate-dependent aminotransferase -
  SMUNN2025_RS00205 (SmuNN2025_0021) recO 28616..29371 (+) 756 WP_002275350.1 DNA repair protein RecO Machinery gene
  SMUNN2025_RS00210 (SmuNN2025_0022) plsX 29579..30577 (+) 999 WP_002277786.1 phosphate acyltransferase PlsX -
  SMUNN2025_RS00215 (SmuNN2025_0023) - 30579..30827 (+) 249 WP_002263135.1 acyl carrier protein -
  SMUNN2025_RS00220 (SmuNN2025_0024) - 31007..31636 (+) 630 Protein_22 ATP-binding cassette domain-containing protein -
  SMUNN2025_RS00225 (SmuNN2025_0025) purC 31758..32465 (+) 708 WP_002263133.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29368.85 Da        Isoelectric Point: 6.6577

>NTDB_id=32355 SMUNN2025_RS00205 WP_002275350.1 28616..29371(+) (recO) [Streptococcus mutans NN2025]
MQTKETRGLVLYNRQFREDDKLVKIFTETSGKHMFFVRHATNSKLSSVIQPLILANFILKINNHGLSYIEDYKGVSLFKE
INADIYKLAYATYLVSLADAAISDAVYDAPLFAFLIKTLELMDEGLDYEILTNIFEIQILDRFGVQLNFHDCVFCHRVGL
AFDFSHRYSGLLCPEHYEKDPYRSHLDPNVPYLLNQFQTLHFDSLKTISVKPDMKQKLRKFIDEVYEDYIGLRLKSKKFI
DDLDHWGQVMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=32355 SMUNN2025_RS00205 WP_002275350.1 28616..29371(+) (recO) [Streptococcus mutans NN2025]
ATGCAGACTAAAGAAACAAGAGGTTTAGTGCTTTATAATCGGCAATTTAGAGAAGATGATAAGCTGGTTAAAATTTTTAC
GGAAACTTCCGGCAAACACATGTTTTTTGTGCGTCATGCTACTAATTCAAAATTGTCTTCTGTCATTCAACCATTGATTC
TAGCTAATTTTATTTTAAAAATTAATAATCATGGACTTTCTTATATTGAAGATTATAAGGGAGTCTCTCTTTTTAAGGAA
ATTAATGCAGATATTTATAAATTAGCTTATGCTACTTACCTTGTGTCTTTGGCTGATGCTGCTATTTCAGATGCTGTCTA
TGATGCCCCTCTTTTTGCTTTTTTAATTAAGACCCTAGAATTGATGGATGAAGGTCTTGATTATGAAATTTTGACCAATA
TTTTTGAAATCCAAATTCTAGATCGCTTTGGCGTTCAACTTAATTTTCATGACTGTGTTTTTTGCCATCGTGTCGGTTTA
GCTTTTGATTTTTCACATCGCTATTCAGGTCTTTTGTGTCCTGAACATTATGAAAAAGATCCTTATCGTAGTCACTTAGA
TCCTAATGTCCCTTACCTTTTGAACCAATTTCAAACTTTACATTTTGATAGCTTAAAGACCATTTCAGTTAAACCTGACA
TGAAACAAAAGCTGAGAAAATTTATTGATGAAGTTTATGAGGACTATATTGGTCTTCGTCTCAAAAGTAAAAAATTTATT
GATGATTTAGATCACTGGGGACAAGTTATGAAATAA

Domains

Predicted by InterProScan.

Recombination protein O N terminal (RecO_N)

(1-77)

Recombination protein O C terminal (RecO_C)

(84-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

65.339

100

0.653

Multiple sequence alignment