Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   EB781_RS09285 Genome accession   NZ_CP033360
Coordinates   1865289..1865894 (+) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica subsp. enterica strain EQAS2016S1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1860289..1870894
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EB781_RS09265 (EB781_09745) - 1860684..1862444 (-) 1761 WP_024792698.1 AAA family ATPase -
  EB781_RS09270 (EB781_09750) matP 1862630..1863082 (+) 453 WP_000877172.1 macrodomain Ter protein MatP -
  EB781_RS09275 (EB781_09755) ompA 1863154..1864206 (-) 1053 WP_001670727.1 porin OmpA -
  EB781_RS09280 (EB781_09760) sulA 1864563..1865072 (-) 510 WP_000288732.1 SOS-induced cell division inhibitor SulA -
  EB781_RS09285 (EB781_09765) sxy/tfoX 1865289..1865894 (+) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  EB781_RS09290 (EB781_09770) yccS 1865881..1868034 (-) 2154 WP_000950876.1 YccS family putative transporter -
  EB781_RS09295 (EB781_09775) - 1868053..1868499 (-) 447 WP_021000158.1 YccF domain-containing protein -
  EB781_RS09300 (EB781_09780) helD 1868623..1870677 (+) 2055 WP_021000159.1 DNA helicase IV -

Sequence


Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=323366 EB781_RS09285 WP_001202375.1 1865289..1865894(+) (sxy/tfoX) [Salmonella enterica subsp. enterica strain EQAS2016S1]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=323366 EB781_RS09285 WP_001202375.1 1865289..1865894(+) (sxy/tfoX) [Salmonella enterica subsp. enterica strain EQAS2016S1]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751


Multiple sequence alignment