Detailed information NTG0323320

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: FDP16_RS07900
• Genome accession: NZ_CP040798
• Coordinates: 1588223..1589158 (-)
• Length: 311 a.a.
• NCBI ID: WP_176799236.1
• Uniprot ID: -
• Organism: Streptococcus sanguinis strain CGMH058
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1583223..1594158

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDP16_RS07880 (FDP16_08195)	nrdF	1583379..1584338 (+)	960	WP_002900761.1	class 1b ribonucleoside-diphosphate reductase subunit beta	-
FDP16_RS07885 (FDP16_08200)	-	1584526..1584831 (-)	306	WP_176799233.1	hypothetical protein	-
FDP16_RS07890 (FDP16_08205)	-	1584910..1585524 (-)	615	WP_176799234.1	DUF6287 domain-containing protein	-
FDP16_RS07895 (FDP16_08210)	-	1585619..1588042 (-)	2424	WP_176799235.1	GBS Bsp-like repeat-containing protein	-
FDP16_RS07900 (FDP16_08215)	comR	1588223..1589158 (-)	936	WP_176799236.1	XRE family transcriptional regulator	Regulator
FDP16_RS07905 (FDP16_08220)	-	1589513..1590429 (-)	917	Protein_1544	diacylglycerol kinase family protein	-
FDP16_RS07910 (FDP16_08230)	-	1590591..1591244 (-)	654	WP_176799237.1	CPBP family intramembrane glutamic endopeptidase	-
FDP16_RS07915 (FDP16_08235)	-	1591266..1591967 (-)	702	WP_176799238.1	CPBP family intramembrane glutamic endopeptidase	-
FDP16_RS07920 (FDP16_08240)	-	1591967..1592506 (-)	540	WP_176799239.1	DUF3267 domain-containing protein	-
FDP16_RS07925 (FDP16_08245)	-	1592535..1593275 (-)	741	WP_176799240.1	DUF3169 family protein	-
FDP16_RS07930 (FDP16_08250)	-	1593511..1593714 (-)	204	WP_008809497.1	helix-turn-helix transcriptional regulator	-
FDP16_RS11920	-	1593726..1593887 (-)	162	WP_256254185.1	hypothetical protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 37002.28 Da
• Isoelectric Point: 4.9237

>NTDB_id=323320 FDP16_RS07900 WP_176799236.1 1588223..1589158(-) (comR) [Streptococcus sanguinis strain CGMH058]
MQGKEFGQHLKQLRLNRGWTKEQLCGDESKLSIRQLTRLELGISQPTLSTLEYLAFCLEVDLTTLTGSKKEDVALPTDYQ
RLKYKLIRTTTYGNTEALFELEHIIDEIFEVYYDDLPEAEQNVMDILQSKIYTYTSEKFHKYGMTLFAQHLDDLQSKKHY
DVNDLLYIQLYQIYVGDEEEIRSAKFDKELYARIAQRLLQSVDYIPNEYLFLMRDALLTIPGIECERKEFIYTKDTLNKL
NIIMELTEDYQKKPLIRMLEGEYELFVHKDEKKAQQYYEEGLTLARLLGHTFLSKKMAEEWNKELRLYHQD

Nucleotide

• Length: 936 bp

>NTDB_id=323320 FDP16_RS07900 WP_176799236.1 1588223..1589158(-) (comR) [Streptococcus sanguinis strain CGMH058]
ATGCAAGGAAAAGAATTTGGACAGCATTTGAAACAGCTTCGATTAAATAGGGGCTGGACCAAGGAGCAATTGTGTGGTGA
TGAGTCAAAGCTTTCTATACGGCAGTTAACCCGTTTGGAGTTAGGCATTTCCCAGCCTACTCTCTCTACTTTAGAATATC
TGGCTTTCTGTCTAGAGGTCGATTTGACAACTTTGACAGGAAGTAAAAAAGAAGATGTAGCTCTACCTACTGACTATCAG
CGCTTGAAGTATAAGCTGATTCGGACGACCACTTATGGCAATACCGAAGCTTTGTTCGAATTGGAGCATATCATAGATGA
AATTTTTGAAGTTTATTATGATGATTTGCCAGAAGCTGAGCAGAATGTAATGGATATCTTGCAATCAAAGATTTATACTT
ATACTTCTGAGAAATTCCATAAGTATGGAATGACTCTCTTTGCCCAGCATTTGGACGATTTGCAGAGTAAAAAGCATTAT
GACGTGAATGATTTACTCTACATCCAGCTCTATCAGATCTATGTGGGAGATGAAGAGGAGATTCGGTCAGCTAAGTTTGA
TAAGGAATTATATGCAAGAATCGCTCAGCGATTACTGCAGTCAGTTGACTATATTCCAAATGAATATCTCTTTCTCATGC
GAGATGCTCTACTGACAATCCCAGGTATTGAGTGCGAGCGAAAAGAGTTCATTTATACAAAAGATACACTCAACAAACTT
AATATAATCATGGAATTGACAGAGGACTATCAAAAGAAACCGCTGATAAGAATGTTAGAGGGAGAATATGAGCTTTTCGT
ACACAAGGACGAGAAAAAGGCTCAACAATACTACGAAGAGGGACTGACGTTGGCAAGATTGTTAGGTCATACTTTTCTAT
CTAAAAAAATGGCTGAGGAGTGGAATAAAGAACTTCGGCTCTATCATCAAGACTAG

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-301)

• Helix-turn-helix domain (HTH_31) (5-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	40.864	96.785	0.396