Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   FDP16_RS06185 Genome accession   NZ_CP040798
Coordinates   1206146..1207882 (-) Length   578 a.a.
NCBI ID   WP_176798985.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain CGMH058     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1201146..1212882
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FDP16_RS06170 (FDP16_06420) brnQ 1201900..1203228 (-) 1329 WP_176798982.1 branched-chain amino acid transport system II carrier protein -
  FDP16_RS06175 (FDP16_06425) - 1203743..1204297 (-) 555 WP_176798983.1 GNAT family N-acetyltransferase -
  FDP16_RS06180 (FDP16_06430) rcrQ 1204354..1206132 (-) 1779 WP_176798984.1 ABC transporter ATP-binding protein Regulator
  FDP16_RS06185 (FDP16_06435) rcrP 1206146..1207882 (-) 1737 WP_176798985.1 ABC transporter ATP-binding protein Regulator

Sequence


Protein


Download         Length: 578 a.a.        Molecular weight: 65213.58 Da        Isoelectric Point: 5.6150

>NTDB_id=323309 FDP16_RS06185 WP_176798985.1 1206146..1207882(-) (rcrP) [Streptococcus sanguinis strain CGMH058]
MLYIWSYLKRYPKWLVLNFVAAIFFVIVNLGLPTVLARMIDEGINPKQTDRLFFWAWVMFGVIVLGVLGRIVLAYAAGKL
TTTMVQDMRNDLYAKLQEYSHHEYEQIGVSSLVTRLTSDAFVLMQFAEQTLKMGVITPMMMLSSILMIFLTSPSLAWIVA
VSVPFLAVVVIYVAVKTKPLSEKQQKTLDKINQYVRENLTGLRVIRAFAREEFQEKRFADENEVYAQNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALDPLRDGSLEIGNLVAFIEYSFHALLSFLFLANLFTMYPRTAVSSQRLKEVMDMPISINPNE
DGITKTDTQGYLEFDNVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSTLVQLIPRFYDVTLGKILVDGVDVRE
YNLKALRQKIGFIPQKALLFTGTIAANLRYGKEEASQEELSQAAEVAQARDFIESREERFETHLAEGGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYKTDAVLRRRLKEVTGQSTVLIVAQRVGTIMDADQIIVLDQGEIVGRGKHEELMETND
IYREIADSQLKNQSLTEE

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=323309 FDP16_RS06185 WP_176798985.1 1206146..1207882(-) (rcrP) [Streptococcus sanguinis strain CGMH058]
ATGTTATACATTTGGTCTTATTTGAAGCGATATCCTAAGTGGCTAGTCTTGAACTTTGTCGCGGCAATCTTTTTTGTAAT
CGTCAATCTAGGTCTGCCAACGGTGCTGGCTCGGATGATTGATGAGGGAATCAATCCTAAGCAGACAGACCGGCTCTTTT
TCTGGGCTTGGGTCATGTTTGGCGTGATTGTCTTAGGAGTGCTGGGGCGGATTGTTCTGGCTTATGCGGCTGGGAAGCTA
ACGACGACCATGGTGCAGGACATGCGCAATGATCTCTATGCCAAGTTGCAAGAGTATTCTCATCATGAGTATGAGCAAAT
TGGTGTATCCTCTTTGGTCACGCGCTTGACTTCTGATGCTTTTGTACTCATGCAGTTTGCGGAGCAAACCCTGAAAATGG
GTGTCATTACTCCCATGATGATGCTGTCCAGTATTCTCATGATTTTTCTGACCAGTCCGTCTCTGGCCTGGATTGTAGCT
GTTTCAGTGCCTTTCTTGGCTGTCGTGGTCATTTATGTAGCGGTTAAAACCAAGCCCTTGTCTGAAAAGCAGCAGAAGAC
TCTTGATAAGATTAATCAGTATGTGAGGGAAAATCTGACTGGTCTGCGCGTTATTCGGGCTTTTGCAAGAGAGGAATTTC
AAGAGAAGCGTTTTGCTGATGAAAATGAGGTCTATGCGCAAAACTCCAATAAGCTCTTTAAGCTGACTGGTCTGACAGAA
CCGCTCTTTGTGCAGATTATTATTGCGATGATTGTGGCCATTGTCTGGTTTGCCCTAGACCCCTTGCGGGACGGCAGTCT
TGAAATCGGAAATCTCGTTGCCTTTATCGAATACAGCTTTCACGCCCTACTGTCCTTCCTCTTCTTGGCCAATCTCTTTA
CCATGTATCCACGGACGGCGGTATCAAGCCAGCGGCTCAAGGAAGTCATGGACATGCCCATTTCAATCAATCCTAATGAA
GATGGTATAACCAAGACAGATACGCAGGGTTATCTGGAGTTCGACAATGTGACCTTCGCTTATCCGGGTGAGACAGAGAG
TCCTGTACTGCATAATATTTCCTTCAAAGCCAAGCCGGGTGAGACTATTGCCTTTATCGGTTCTACTGGTTCGGGTAAGT
CTACACTGGTGCAGCTGATTCCTCGCTTTTACGATGTAACACTTGGTAAGATTTTAGTGGATGGTGTGGACGTCCGCGAG
TACAATCTGAAAGCTCTGCGTCAGAAGATTGGCTTTATCCCGCAGAAAGCTCTGCTATTTACCGGAACTATCGCAGCAAA
CCTACGCTACGGAAAGGAAGAAGCTAGCCAAGAGGAGCTGAGTCAGGCGGCTGAGGTTGCTCAAGCCAGGGACTTTATCG
AGAGCCGGGAAGAGCGTTTTGAGACTCATCTGGCCGAAGGAGGCAGCAATCTATCTGGTGGGCAGAAGCAGCGGCTCTCT
ATCGCCCGTGCGGTGGTCAAAAAGCCGGATATTTATATCTTCGACGACTCTTTTTCTGCCCTGGATTATAAGACAGATGC
GGTGCTTCGTCGTCGTCTCAAGGAAGTGACAGGTCAGTCAACAGTGCTGATTGTAGCCCAACGGGTGGGAACTATCATGG
ACGCTGACCAGATTATCGTCTTGGATCAGGGCGAAATCGTCGGACGCGGGAAGCACGAAGAGCTGATGGAAACCAATGAT
ATCTATCGTGAAATTGCGGATTCGCAGCTGAAAAATCAATCTTTGACAGAGGAGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.632

93.599

0.362


Multiple sequence alignment