Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   FDP16_RS03440 Genome accession   NZ_CP040798
Coordinates   672778..673464 (+) Length   228 a.a.
NCBI ID   WP_009659088.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain CGMH058     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 667778..678464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FDP16_RS03415 (FDP16_03555) - 667899..668426 (-) 528 WP_176798584.1 DUF2975 domain-containing protein -
  FDP16_RS03420 (FDP16_03560) - 668633..669139 (+) 507 WP_176798585.1 DUF3592 domain-containing protein -
  FDP16_RS03425 (FDP16_03565) - 669249..670443 (-) 1195 Protein_646 ferric reductase-like transmembrane domain-containing protein -
  FDP16_RS03430 (FDP16_03570) - 670768..671160 (+) 393 WP_176798586.1 DUF805 domain-containing protein -
  FDP16_RS03435 (FDP16_03575) - 671423..672628 (-) 1206 WP_176798587.1 DUF2974 domain-containing protein -
  FDP16_RS03440 (FDP16_03580) braR 672778..673464 (+) 687 WP_009659088.1 response regulator transcription factor Regulator
  FDP16_RS03445 (FDP16_03585) - 673448..674428 (+) 981 WP_176798588.1 sensor histidine kinase -
  FDP16_RS03450 (FDP16_03590) - 674440..674529 (+) 90 Protein_651 NrdI protein -
  FDP16_RS03455 (FDP16_03595) - 674674..676302 (+) 1629 WP_176798589.1 hypothetical protein -
  FDP16_RS03460 (FDP16_03600) - 676311..677009 (+) 699 WP_176798590.1 hypothetical protein -
  FDP16_RS12050 - 677015..677233 (+) 219 WP_371277900.1 hypothetical protein -
  FDP16_RS12055 - 677230..677799 (+) 570 WP_371277902.1 AAA family ATPase -
  FDP16_RS12060 - 677961..678113 (+) 153 WP_371278056.1 hypothetical protein -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 26261.43 Da        Isoelectric Point: 5.3362

>NTDB_id=323285 FDP16_RS03440 WP_009659088.1 672778..673464(+) (braR) [Streptococcus sanguinis strain CGMH058]
MHKILLVEDDPVIRQMIKKMLEQWGFQVVAVEDFMDVLTVFVREEPHLVLMDIGLPLFNGYHWCQEIRKISTVPIMFLSS
RDQSMDIVMAINMGADDYVTKPFDNNVFLAKVQGLLRRSYEFGNDQSLLEHQGVILNLKSTDLVFDGKVVTLTKNEFQIL
RVLFEHSDGIVARDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEHGLKNFIETKKGIGYGLINGHTG

Nucleotide


Download         Length: 687 bp        

>NTDB_id=323285 FDP16_RS03440 WP_009659088.1 672778..673464(+) (braR) [Streptococcus sanguinis strain CGMH058]
ATGCACAAGATTTTACTAGTAGAAGATGATCCAGTCATCCGTCAAATGATTAAAAAAATGTTGGAACAATGGGGCTTTCA
GGTAGTGGCAGTTGAGGACTTTATGGATGTGCTGACTGTCTTTGTCCGAGAGGAGCCGCATCTGGTGCTGATGGATATCG
GCTTGCCCTTGTTTAACGGCTATCATTGGTGTCAGGAAATCCGCAAGATTTCAACGGTGCCTATCATGTTTCTGTCTTCC
CGCGATCAGTCCATGGACATTGTCATGGCTATCAATATGGGGGCAGATGACTATGTGACCAAGCCTTTTGACAATAATGT
CTTTCTGGCTAAAGTTCAGGGCTTGCTGCGCCGTTCCTATGAATTTGGAAATGACCAAAGTCTCTTGGAGCACCAAGGTG
TCATTCTCAATCTCAAGTCAACAGATCTGGTCTTTGATGGGAAAGTGGTGACCTTGACAAAGAACGAATTTCAGATTTTA
CGGGTTCTCTTCGAGCATTCTGATGGTATCGTGGCGCGTGATGACCTGATGAAGGAACTCTGGAACAGTGACTTTTTCAT
CGATGACAATACCCTATCGGTCAATGTCGCTCGCCTGCGTAAAAAGCTTGAAGAGCACGGACTGAAGAATTTCATCGAAA
CCAAAAAAGGAATAGGATACGGTCTCATCAATGGACACACAGGATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.165

95.614

0.461