Detailed information NTG0323252

Bioinformatically predicted

Overview

• Name: lytF
• Type: Regulator
• Locus tag: FDP16_RS00295
• Genome accession: NZ_CP040798
• Coordinates: 46302..48257 (-)
• Length: 651 a.a.
• NCBI ID: WP_176798136.1
• Uniprot ID: -
• Organism: Streptococcus sanguinis strain CGMH058
• Function: cell lysis (predicted from homology) Cell lysis

Genomic Context

Location: 41302..53257

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDP16_RS00270 (FDP16_00275)	-	41372..42580 (+)	1209	WP_176798131.1	PD-(D/E)XK nuclease family protein	-
FDP16_RS00275 (FDP16_00280)	purM	42577..43596 (+)	1020	WP_176798132.1	phosphoribosylformylglycinamidine cyclo-ligase	-
FDP16_RS00280 (FDP16_00285)	purN	43593..44144 (+)	552	WP_176798133.1	phosphoribosylglycinamide formyltransferase	-
FDP16_RS00285 (FDP16_00290)	-	44189..44653 (+)	465	WP_176798134.1	GNAT family N-acetyltransferase	-
FDP16_RS00290 (FDP16_00295)	purH	44655..46202 (+)	1548	WP_176798135.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
FDP16_RS00295 (FDP16_00300)	lytF	46302..48257 (-)	1956	WP_176798136.1	GBS Bsp-like repeat-containing protein	Regulator
FDP16_RS00300 (FDP16_00310)	purD	48581..49846 (+)	1266	WP_176798137.1	phosphoribosylamine--glycine ligase	-
FDP16_RS00305 (FDP16_00315)	purE	50037..50525 (+)	489	WP_176798138.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
FDP16_RS00310 (FDP16_00320)	purK	50512..51591 (+)	1080	WP_176798139.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
FDP16_RS00315 (FDP16_00325)	-	51739..52374 (+)	636	WP_176798140.1	YdcF family protein	-
FDP16_RS00320 (FDP16_00330)	-	52389..52616 (+)	228	WP_176798141.1	phosphoribosylaminoimidazole carboxylase	-

Sequence

Protein

• Length: 651 a.a.
• Molecular weight: 72259.70 Da
• Isoelectric Point: 6.6727

>NTDB_id=323252 FDP16_RS00295 WP_176798136.1 46302..48257(-) (lytF) [Streptococcus sanguinis strain CGMH058]
MKKYQKLFLLSGAVLGLFASHSTAQAVESTESEVKILGPTDRASSVDVTVNDRTASISYTRSQAQEPHRILHAVWSDENG
QDDIKWYEAPSTTTTNTDIDLSNHPGYGTFHVHTYIDLYGKLIGLNGTTFTLNKPAVNVTSNILGKTAQINFNRNKDQIN
SNILHAVWSDENGQDDIKWYNAGQDITEFELSNHKGYGTYHIHTYENKDGKMIGLNGTTFNLEKPNPTVETSFPQTGIME
ITVKNVPDTMHRIVLPTWSEKNGQDDLQWYEASKNPDGSYSARVELRKHNYDTGTYNIHLYGESYVKSDLTGLSGTTVQI
DSGKLPSEEEQKPLYTVENINPKQGTYTVKIAETALSKPIKSVQVPIWSTSNQSNLKWYKATPNGDGTFSATFDIRNHQA
LSGTYNNHIYITYNDGSEHNYAADAVSMSTDQIQAKVAVRKTEANRYEVTVTDAYGGGDIVLPTWSEVNGQDDIKWYTAN
KVGNGTYKFTVDTQNHKGSGLFNTHVYRRKAGQLIGLTGTSYQVEKSNVQSANIQPNYAAANATTYPVGQCTWGAKALAP
WAGNYWGNGGQWAASARRAGFRTGSTPEVGAIACWDDGGYGHVGVVTHVESNTRIQIQESNYLGKQYISNFRGWFDPTAS
YWGRLTYIYPK

Nucleotide

• Length: 1956 bp

>NTDB_id=323252 FDP16_RS00295 WP_176798136.1 46302..48257(-) (lytF) [Streptococcus sanguinis strain CGMH058]
ATGAAGAAATATCAAAAACTGTTTTTATTATCTGGAGCTGTCCTAGGTCTCTTTGCAAGCCACTCTACAGCTCAGGCAGT
TGAATCAACCGAATCTGAAGTCAAAATTCTAGGCCCCACTGATCGTGCCAGCAGTGTCGATGTGACTGTGAACGATCGTA
CAGCCTCTATTAGTTATACCCGTTCCCAAGCTCAAGAACCTCATCGTATTCTCCACGCTGTTTGGTCTGACGAGAACGGA
CAGGATGATATCAAATGGTATGAAGCACCGTCAACAACTACCACTAATACTGACATTGACCTAAGTAACCATCCCGGTTA
CGGAACCTTTCATGTTCATACCTATATTGATCTCTATGGAAAATTAATTGGACTGAATGGAACGACCTTTACTCTCAACA
AACCAGCCGTTAATGTCACTTCTAATATCCTAGGGAAAACCGCTCAAATTAACTTTAATCGCAATAAAGACCAAATAAAT
TCTAATATTTTACATGCTGTTTGGTCTGATGAAAATGGACAAGATGATATCAAATGGTACAATGCAGGACAAGATATTAC
TGAATTTGAACTTTCAAATCACAAAGGCTATGGAACTTATCATATTCATACTTATGAAAATAAAGATGGTAAGATGATTG
GCTTAAACGGAACCACTTTCAATTTAGAAAAACCTAATCCTACTGTTGAGACTAGCTTCCCTCAGACCGGTATCATGGAA
ATTACTGTCAAAAACGTACCCGATACCATGCATCGAATTGTTCTTCCAACTTGGTCTGAGAAAAATGGGCAAGATGATCT
ACAATGGTACGAAGCAAGCAAAAATCCGGATGGCAGCTACAGCGCTCGGGTGGAACTCAGAAAGCATAACTACGACACTG
GGACTTACAATATCCATCTTTACGGTGAAAGTTATGTTAAGTCTGACTTAACAGGTCTCTCAGGGACTACTGTACAAATT
GATAGTGGAAAATTGCCTTCTGAAGAGGAGCAAAAGCCGCTTTATACTGTAGAAAATATCAACCCCAAACAAGGAACCTA
TACTGTAAAAATTGCTGAAACAGCTTTATCTAAACCTATAAAGTCTGTCCAAGTTCCCATTTGGAGCACTAGCAATCAGA
GTAATCTTAAATGGTATAAGGCAACGCCTAACGGAGACGGAACCTTCAGTGCGACCTTTGATATCCGCAATCATCAGGCT
TTGTCTGGGACCTATAATAATCACATCTATATCACTTACAATGATGGTAGCGAACACAACTACGCAGCAGATGCCGTCTC
AATGTCTACCGACCAAATTCAAGCCAAGGTTGCAGTCAGGAAAACTGAGGCCAATCGCTATGAGGTGACCGTGACAGACG
CCTACGGAGGTGGCGATATTGTTCTGCCAACTTGGTCAGAAGTCAATGGGCAAGATGATATCAAATGGTATACTGCAAAT
AAGGTCGGCAATGGAACTTACAAATTTACCGTGGATACTCAGAATCACAAGGGTAGCGGTCTATTTAACACCCATGTCTA
TCGTAGAAAAGCGGGACAGTTAATCGGCCTGACTGGAACTAGCTATCAGGTTGAAAAATCAAACGTTCAATCAGCTAATA
TTCAGCCTAACTATGCCGCTGCTAATGCGACAACTTATCCTGTCGGCCAATGCACTTGGGGAGCTAAAGCTCTAGCTCCT
TGGGCAGGAAATTACTGGGGCAACGGCGGTCAATGGGCAGCTAGTGCCAGAAGAGCTGGATTCCGTACCGGCAGTACGCC
TGAGGTTGGCGCCATCGCCTGCTGGGATGACGGTGGCTACGGCCACGTCGGTGTCGTGACTCATGTCGAATCCAATACCC
GCATCCAGATCCAAGAGTCTAACTACCTCGGCAAGCAATACATCAGCAACTTCCGTGGCTGGTTTGACCCAACTGCTTCC
TACTGGGGCCGCCTGACCTATATCTACCCTAAATAA

Domains

Predicted by InterProScan.

• GBS Bsp-like repeat (GBS_Bsp-like) (155-220)

• GBS Bsp-like repeat (GBS_Bsp-like) (234-305)

• GBS Bsp-like repeat (GBS_Bsp-like) (440-516)

• GBS Bsp-like repeat (GBS_Bsp-like) (65-128)

• GBS Bsp-like repeat (GBS_Bsp-like) (337-422)

• CHAP domain (CHAP) (544-621)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
lytF	Streptococcus gordonii strain NCTC7865	45.698	80.338	0.367