Detailed information NTG0323118

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: EB816_RS01495
• Genome accession: NZ_CP033337
• Coordinates: 275086..276009 (+)
• Length: 307 a.a.
• NCBI ID: WP_023612424.1
• Uniprot ID: A0A5S4TJJ9
• Organism: Streptococcus pyogenes strain TSPY453
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 270086..281009

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EB816_RS01480 (EB816_01485)	amiC	271586..273088 (+)	1503	WP_011017334.1	ABC transporter permease	Regulator
EB816_RS01485 (EB816_01490)	amiD	273088..274014 (+)	927	WP_023612408.1	oligopeptide ABC transporter permease OppC	Regulator
EB816_RS01490 (EB816_01495)	amiE	274023..275093 (+)	1071	WP_023612409.1	ABC transporter ATP-binding protein	Regulator
EB816_RS01495 (EB816_01500)	amiF	275086..276009 (+)	924	WP_023612424.1	ABC transporter ATP-binding protein	Regulator
EB816_RS01505 (EB816_01510)	-	276157..276336 (-)	180	WP_023612403.1	hypothetical protein	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34741.94 Da
• Isoelectric Point: 6.4036

>NTDB_id=323118 EB816_RS01495 WP_023612424.1 275086..276009(+) (amiF) [Streptococcus pyogenes strain TSPY453]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELVVYYPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=323118 EB816_RS01495 WP_023612424.1 275086..276009(+) (amiF) [Streptococcus pyogenes strain TSPY453]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAGTCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGTTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAATCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGAATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAACCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTCTTGAATCTTCTTAAAAGAATGCAAGCCGAAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATTATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-261)

3D structure

• AlphaFold DB: A0A5S4TJJ9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.353	99.674	0.821
amiF	Streptococcus thermophilus LMD-9	82.026	99.674	0.818
amiF	Streptococcus salivarius strain HSISS4	82.026	99.674	0.818