Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | FGE23_RS13230 | Genome accession | NZ_CP040672 |
| Coordinates | 2600054..2600416 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain X030 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2595054..2605416
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGE23_RS13200 | flgD | 2595957..2596397 (+) | 441 | WP_003154247.1 | flagellar hook assembly protein FlgD | - |
| FGE23_RS13205 | flgG | 2596422..2597198 (+) | 777 | WP_003154244.1 | flagellar basal body rod protein FlgG | - |
| FGE23_RS13210 | - | 2597238..2597453 (+) | 216 | WP_003154243.1 | flagellar FlbD family protein | - |
| FGE23_RS13215 | fliL | 2597450..2597869 (+) | 420 | WP_014305005.1 | flagellar basal body-associated protein FliL | - |
| FGE23_RS13220 | fliM | 2597903..2598901 (+) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| FGE23_RS13225 | fliY | 2598891..2600027 (+) | 1137 | WP_146276772.1 | flagellar motor switch phosphatase FliY | - |
| FGE23_RS13230 | pilH | 2600054..2600416 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| FGE23_RS13235 | fliZ | 2600431..2601084 (+) | 654 | WP_146276774.1 | flagella biosynthesis regulatory protein FliZ | - |
| FGE23_RS13240 | fliP | 2601077..2601742 (+) | 666 | WP_007409786.1 | flagellar type III secretion system pore protein FliP | - |
| FGE23_RS13245 | fliQ | 2601757..2602026 (+) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| FGE23_RS13250 | fliR | 2602033..2602812 (+) | 780 | WP_146276776.1 | flagellar biosynthetic protein FliR | - |
| FGE23_RS13255 | flhB | 2602812..2603891 (+) | 1080 | WP_007409787.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=323100 FGE23_RS13230 WP_003154238.1 2600054..2600416(+) (pilH) [Bacillus amyloliquefaciens strain X030]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=323100 FGE23_RS13230 WP_003154238.1 2600054..2600416(+) (pilH) [Bacillus amyloliquefaciens strain X030]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTTGAAAAATTCAAAGAGCATTCCCCCGACCTAGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTCTAAAGGAAATTAAACAGATCGATCCGCAGGCGAAAATCATCATG
TGTTCAGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCATTCCA
AGCGGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTTGAAAAATTCAAAGAGCATTCCCCCGACCTAGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTCTAAAGGAAATTAAACAGATCGATCCGCAGGCGAAAATCATCATG
TGTTCAGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCATTCCA
AGCGGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |