Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   EB817_RS08710 Genome accession   NZ_CP033336
Coordinates   1715036..1715749 (+) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY165     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1710036..1720749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EB817_RS08700 (EB817_08715) treC 1711106..1712734 (-) 1629 WP_129304959.1 alpha,alpha-phosphotrehalase -
  EB817_RS08705 (EB817_08720) treP 1712801..1714825 (-) 2025 WP_129304960.1 PTS system trehalose-specific EIIBC component -
  EB817_RS08710 (EB817_08725) treR 1715036..1715749 (+) 714 WP_002992823.1 trehalose operon repressor Regulator
  EB817_RS08720 (EB817_08735) - 1715986..1716366 (-) 381 Protein_1605 helix-turn-helix domain-containing protein -
  EB817_RS08725 (EB817_08740) - 1716552..1717409 (+) 858 WP_129304962.1 VOC family protein -
  EB817_RS08730 (EB817_08745) yaaA 1717451..1718182 (+) 732 WP_111705297.1 peroxide stress protein YaaA -
  EB817_RS08735 (EB817_08750) nrdG 1718356..1718970 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  EB817_RS08740 (EB817_08755) - 1718970..1719479 (-) 510 WP_111676874.1 GNAT family N-acetyltransferase -
  EB817_RS08745 (EB817_08760) - 1719488..1720423 (-) 936 WP_129304963.1 Gfo/Idh/MocA family oxidoreductase -
  EB817_RS09345 - 1720452..1720598 (-) 147 WP_164976447.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=323094 EB817_RS08710 WP_002992823.1 1715036..1715749(+) (treR) [Streptococcus pyogenes strain TSPY165]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=323094 EB817_RS08710 WP_002992823.1 1715036..1715749(+) (treR) [Streptococcus pyogenes strain TSPY165]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment