Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   FGE23_RS05245 Genome accession   NZ_CP040672
Coordinates   1037341..1038168 (+) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens strain X030     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1032341..1043168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGE23_RS05220 - 1033416..1034849 (+) 1434 WP_095318603.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  FGE23_RS05225 tmk 1034846..1035484 (+) 639 WP_102422420.1 dTMP kinase -
  FGE23_RS05230 darA 1035555..1035884 (+) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  FGE23_RS05235 - 1035897..1036337 (+) 441 WP_004264730.1 YaaR family protein -
  FGE23_RS05240 holB 1036349..1037338 (+) 990 WP_128574753.1 DNA polymerase III subunit delta' -
  FGE23_RS05245 yaaT 1037341..1038168 (+) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  FGE23_RS05250 yabA 1038183..1038542 (+) 360 WP_004264720.1 replication initiation-control protein YabA -
  FGE23_RS05255 - 1038603..1039346 (+) 744 WP_004264717.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  FGE23_RS05260 - 1039333..1039632 (+) 300 WP_007409921.1 GIY-YIG nuclease family protein -
  FGE23_RS05265 rsmI 1039607..1040488 (+) 882 WP_070081259.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  FGE23_RS05270 abrB 1040538..1040828 (-) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=323035 FGE23_RS05245 WP_004264723.1 1037341..1038168(+) (yaaT) [Bacillus amyloliquefaciens strain X030]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=323035 FGE23_RS05245 WP_004264723.1 1037341..1038168(+) (yaaT) [Bacillus amyloliquefaciens strain X030]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGGAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTCATTCGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCCTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAATT
TACGTTTGACCGCAATAAAGTCATTTTTTACTTTACGGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTAAGGGACGAGGCGAAAATGCTCGGCGGTATCGGACCA
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967