Detailed information NTG0032283

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: VS_RS11795
• Genome accession: NC_011753
• Coordinates: 2681801..2685190 (+)
• Length: 1129 a.a.
• NCBI ID: WP_009847560.1
• Uniprot ID: A0A2N7NI95
• Organism: Vibrio atlanticus
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2676801..2690190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VS_RS11770 (VS_2501)	erpA	2677088..2677429 (-)	342	WP_041473000.1	iron-sulfur cluster insertion protein ErpA	-
VS_RS11775 (VS_2502)	hemL	2677726..2679021 (+)	1296	WP_012604713.1	glutamate-1-semialdehyde 2,1-aminomutase	-
VS_RS22930	-	2679163..2679288 (-)	126	WP_009847557.1	hypothetical protein	-
VS_RS11785 (VS_2503)	-	2679365..2680450 (+)	1086	WP_009847558.1	AI-2E family transporter	-
VS_RS11790 (VS_2504)	rsmC	2680561..2681583 (+)	1023	WP_012604714.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
VS_RS11795 (VS_2505)	chiS	2681801..2685190 (+)	3390	WP_009847560.1	response regulator	Regulator
VS_RS11800 (VS_2506)	-	2685900..2687582 (+)	1683	WP_009847561.1	ABC transporter substrate-binding protein	-
VS_RS11805 (VS_2507)	-	2687752..2688738 (+)	987	WP_009847562.1	ABC transporter permease	-
VS_RS11810 (VS_2508)	-	2688741..2689766 (+)	1026	WP_009847563.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127231.80 Da
• Isoelectric Point: 5.2236

>NTDB_id=32283 VS_RS11795 WP_009847560.1 2681801..2685190(+) (chiS) [Vibrio atlanticus]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARANAQQRYIQGSGDQIKTSILPESSSFIGSERYRLLHKRYHNSYLELLKRSDF
DDILLVDINGNIAYSVFKRDDYGTNLLTGKYKDANLGKTFQRLEKDVKDKRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGDDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFDNAQDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMLLIKSQNDELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDINKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDSS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELDNYSDSGSYSHFQAPDLIDNSQQENSVISEDP
DGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVDVMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIETLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=32283 VS_RS11795 WP_009847560.1 2681801..2685190(+) (chiS) [Vibrio atlanticus]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGCTGGCATTTCTTGTCCTTAGTATTAC
CCCAGTAACACTTATCGCGATATTTTTCCTCCAATCGCACAGTCAGGATCTTCAGGAACAAAGTACTTCGCACCTTGTTT
CCGTCCGTGATACTAAACAGCAGCAAATTGTCGATTACCTACAAGCTCAAGAATCCCAAGTGATGGGTTTTGTGCGCTCA
GAGCTTGCCAATGCCAGTGGCGGACGATTCTATGGTTTGATCAATGCATTCCAACGCCTAGGGTTAGACATTGACGAAGC
ACGCGCTAATGCGCAGCAGCGCTACATTCAAGGATCGGGCGATCAAATCAAAACATCGATTCTTCCTGAATCCAGCAGCT
TTATTGGCAGCGAGCGCTATCGTCTACTTCACAAACGCTACCACAACTCTTATTTAGAGCTGCTTAAGCGTTCAGATTTT
GACGACATTTTATTGGTCGACATTAACGGTAACATCGCTTATTCAGTTTTTAAGCGCGATGACTACGGCACCAACTTGCT
GACTGGTAAGTACAAAGATGCAAACCTCGGCAAAACCTTTCAACGCCTGGAAAAGGACGTAAAAGACAAACGCAAATCCA
ACGAAGACTACACACCGGTTATCGTTTCTGACTTTAAAGACGAAAATGGTAAACAGACCGCATGGTTAGGCGCCCCTATC
GTTCAACAGGGCTACCTACACAGTTACGCCATGTTTAGACTGCCCATCAATGGTATTACTAAGCTTATTGCCGATCTCAA
CAAGAGTTCGAATATTCAAACCTTGCTTGTCGGCGATGATCATCTGCCACGTAGCCTTGCCCATTCACAAGAGTCGATTA
ATCTGAGTTTAGATGTTGTTGATAAAGCTCTGGCAGGAGAAACGGCCGTTGGCACCTTCGACAACGCTCAGGATCAAGCG
ATCATCGCTGCATATACTCCAATTGAGCTCAAATATGCGACTTGGGCACTCGTCGTCGAGCTTCCAGAGAAAGAAGCGTT
TGCCCGTATTCATCAGTTAGAAAAGATCTTTGTGATCGTGATGTTGACGGCGATTATTCTTGTATTTGTCGCATCTCATT
ATCTGTCTAACTTCATCACATCACCGTTACTCAAGCTCACATGGGCAGCAGAGAAAGTCTCTGCGGGTGACCTTGATGAA
ACCATGATTAATACTGAACGAAAAGATGAGATAGGCCGCCTCGCGGTAAGCTTCGAAAGAATGCAACGTTCGATTCGTGA
AAAGATGCTGCTCATTAAGAGCCAAAATGATGAGCTTGAGGACAACCTTAAGACCATTCAAAAACAAAATGAAGAGTTGC
AACTGGCCAACAAACTTAAAGATGAATTCTTAGCAACAACATCACACGAATTGAGAACGCCATTACATGGCATGGTAGGT
ATCGCTGAAGCGCTAATCTCTGGCGCAAACGGTCCTATTCCTGCCAACCAGAAGTACCAGTTGGATATCATCATCAATAG
TGGCCAGAGATTGGCAACACTGGTCGATGATCTACTTGATTACCACAAAATGCGCTACGGCAGTTTAGACATAAATAAAT
CTGCTGTTGATTTATCTGCTGCTACCAGCTTGGTACTAGAATTGTCTCATCATCTGTTGGGCAATAAGCCAATCCGAATT
ATTAACCAAGTACCCAGTGACTTAGGGTTGGTTTCGTCCGATCCTCAACGATTAGAACAAGTGATGTATAACTTGGTGGG
CAATGCCATCAAGTACACATCAGAAGGTAAAATTGTTATCTCAGCAAGCGTTATCGACGACAACATTCGTGTACAAGTTG
TTGATACAGGCCAAGGTATACCTGCTGAATACTTAGAACACATCTTTGAACCACTGATTCAAGCAGGACAAGACTCAAGT
AACTATCGCCAAGGTGCAGGGCTTGGGTTGTCGATAAGTCGTCAACTGATTGAACTGATGGGCGGTTCACTGTACGTAAG
TAGCCAACCAATGCTTGGCACGACGTTCAGCTTTACCCTGCCTTTAGCCACCCAAGAAGAATTAGATAACTACAGTGATT
CAGGAAGCTATTCGCACTTCCAAGCGCCAGATTTAATTGATAACAGCCAACAAGAAAATAGTGTTATCAGTGAAGATCCA
GACGGTCCGTTACTGGTTATCGCCGACGATGAACCAGTAAATTTACGCGTGCTAGACAGTTTCTTGAAATTGGAAGGTTA
TCGAGTGCGCACCGCATGTGACGGCCCAGAAACCATTGAACTGATTGAGAAAGAGAAGCCAGAGTTACTTCTGCTCGATA
TTATGATGCCAGGTATGAGTGGCTATCAGGTGTGTGAAGCTCTGCGTAAGCAATACGATCATGCACAGTTGCCAATCATC
ATGCTCACAGCTCTTAATCAAGCAGAAGACCGTGTTCGTGGCTTTGAAGCTGGTGCCAACGATTACTTGTCTAAACCGTT
CAACAAACAAGAGCTGGCGGCGCGAATTACGGCTCACTTATCAGCAAGCAAAGCTGAGCAAAGACGTCTTGAGAATGATC
AGCTGCAACTAGAACTTAAACACAGGGCCATGGTTGAAGCTAACCTACTAGAAACTCAAGGGCGTTTGCTAGAGCAATTA
GAATCAGCCCCTGAGGCCATCATCTGTATTCGTGATGACCAACGAATTCGATTTGCCAACGAAGCTGCAGCAAAACTATT
TAGGCGCGGGCAAGAGCAGCTTAAACGCTCTATGGCCGATGAGATCATTGCGCCTAAATACCTTAAGGTGGAACAAGCTC
ACTACTGTGGTGATATTGACATCTATATAGACGACACTCGTCAGCGGATACCAAGTGATATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACCATGTATATCTTTAATGTTGGTGGTGGGGTTAACTCAAACCGAGTCAATAACCTTGAAACGGCGGT
TGAGGCACTTTCAAGCTACGCCTTTGAGGGTGACAAAGATAAACTTCAACAACTGAAAGAACTTGGCGGTGAATTTACTC
GCCTTGCAGATAAAGCAACCGGTGAAGGTAAAAACAAACAAGAGCTGATGCGTGAAGTGCTGGTCGATGTCATGACTAAT
GCCATCATCTACTGGGAGTCTGTTACAGGGGAAACCAAGTTTGCCTTCGCAGAGAAGAGTGGCTTGTGGCGTGTCTACCT
AGACCGCAGTACCCTGCAAACTAGAACGCTAGACAAATATCTACGTGTAGAAACTCTACCGAAAACGCCTCGCTGGCGAA
CGGTACTGAGCTCTATCGAGTTTATACTTGAGCACTGTAAAGAACAGACACCTGAAAGAACTCATATTGAGACACTAAGG
GATAAGCTACAAAAACTACTGACCAGTTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (726-836)

• PAS domain (PAS_8) (880-914)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

3D structure

• AlphaFold DB: A0A2N7NI95

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.996	100	0.76