Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   D9Y32_RS17350 Genome accession   NZ_CP033218
Coordinates   3362353..3362814 (+) Length   153 a.a.
NCBI ID   WP_003181285.1    Uniprot ID   A0A1Y0YEG4
Organism   Bacillus licheniformis strain TCCC 11148     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3357353..3367814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9Y32_RS17325 (D9Y32_17345) fadH 3358377..3359141 (-) 765 WP_003181295.1 2,4-dienoyl-CoA reductase -
  D9Y32_RS17330 (D9Y32_17350) - 3359287..3360144 (+) 858 WP_003181293.1 metallophosphoesterase -
  D9Y32_RS17340 (D9Y32_17360) - 3360324..3360821 (+) 498 WP_003181289.1 L,D-transpeptidase family protein -
  D9Y32_RS17345 (D9Y32_17365) - 3360910..3362211 (+) 1302 WP_003181287.1 MFS transporter -
  D9Y32_RS17350 (D9Y32_17370) kre 3362353..3362814 (+) 462 WP_003181285.1 YkyB family protein Regulator
  D9Y32_RS17355 (D9Y32_17375) - 3362845..3363762 (-) 918 WP_061576650.1 chemotaxis protein -
  D9Y32_RS17360 (D9Y32_17380) - 3363836..3365155 (-) 1320 WP_044790049.1 MFS transporter -
  D9Y32_RS17365 (D9Y32_17385) - 3365252..3365776 (-) 525 WP_003181280.1 RDD family protein -
  D9Y32_RS23120 - 3365948..3366106 (+) 159 WP_016885792.1 hypothetical protein -
  D9Y32_RS17370 (D9Y32_17390) - 3366298..3367478 (+) 1181 Protein_3383 aminotransferase A -

Sequence


Protein


Download         Length: 153 a.a.        Molecular weight: 17600.40 Da        Isoelectric Point: 10.6730

>NTDB_id=322743 D9Y32_RS17350 WP_003181285.1 3362353..3362814(+) (kre) [Bacillus licheniformis strain TCCC 11148]
MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFANLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPASKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=322743 D9Y32_RS17350 WP_003181285.1 3362353..3362814(+) (kre) [Bacillus licheniformis strain TCCC 11148]
ATGGACGACCATAATCATACGAAAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTTAACCGCCA
TGCGAAAACCGCGACTAATCCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTTAATGAAGGAAAAG
GTAAAAAGGTAGGCCTGCATTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCAGATGTGCTGATATCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAACCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCCTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATCAAAGAAAAACCGCTCGTCA
CAAACCGGAAGCGTCCAGCCTCAAAACCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTTTAA

Domains


Predicted by InterproScan.

(14-128)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1Y0YEG4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.83


Multiple sequence alignment