Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   D9Y32_RS00055 Genome accession   NZ_CP033218
Coordinates   8481..8651 (-) Length   56 a.a.
NCBI ID   WP_031314537.1    Uniprot ID   -
Organism   Bacillus licheniformis strain TCCC 11148     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3481..13651
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9Y32_RS00030 (D9Y32_00030) - 3848..4822 (-) 975 WP_061576203.1 ABC transporter ATP-binding protein -
  D9Y32_RS00035 (D9Y32_00035) - 5006..5734 (-) 729 WP_392387298.1 DUF2268 domain-containing protein -
  D9Y32_RS00040 (D9Y32_00040) fabF 5822..7060 (-) 1239 WP_061576201.1 beta-ketoacyl-ACP synthase II -
  D9Y32_RS00045 (D9Y32_00045) - 7082..8020 (-) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  D9Y32_RS00050 (D9Y32_00050) - 8190..8429 (+) 240 WP_069500393.1 hypothetical protein -
  D9Y32_RS00055 (D9Y32_00055) comZ 8481..8651 (-) 171 WP_031314537.1 ComZ family protein Regulator
  D9Y32_RS00060 (D9Y32_00060) med 8677..9630 (-) 954 WP_044790144.1 BMP family ABC transporter substrate-binding protein Regulator
  D9Y32_RS00065 (D9Y32_00065) - 9717..10292 (-) 576 WP_061576199.1 hypothetical protein -
  D9Y32_RS00070 (D9Y32_00070) - 10379..11113 (-) 735 WP_009328850.1 hypothetical protein -
  D9Y32_RS00075 (D9Y32_00075) - 11345..11539 (+) 195 WP_009328851.1 YjzD family protein -
  D9Y32_RS00080 (D9Y32_00080) - 11611..11790 (-) 180 WP_003180573.1 YjzC family protein -
  D9Y32_RS00085 (D9Y32_00085) - 11972..12784 (+) 813 WP_061576198.1 undecaprenyl-diphosphate phosphatase -

Sequence

Protein


Download         Length: 56 a.a.        Molecular weight: 6274.27 Da        Isoelectric Point: 3.9646

>NTDB_id=322688 D9Y32_RS00055 WP_031314537.1 8481..8651(-) (comZ) [Bacillus licheniformis strain TCCC 11148]
MEFLQIAMKYVPEAKEEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKADAGSDA

Nucleotide


Download         Length: 171 bp        

>NTDB_id=322688 D9Y32_RS00055 WP_031314537.1 8481..8651(-) (comZ) [Bacillus licheniformis strain TCCC 11148]
ATGGAATTTTTGCAAATTGCCATGAAATACGTTCCGGAAGCGAAAGAAGAGATGGAGAAAGCGGGAATCGAACTTTCGCC
GGAAATGCTTGAGCCGTTCATGAACCTGTTTACAAAAGTGATGGCGGAAGCTTACGAGCTCGGTAAAGCGGACGCCGGTT
CTGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75

Multiple sequence alignment