Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   D2B33_RS12350 Genome accession   NZ_CP033198
Coordinates   2434165..2434626 (+) Length   153 a.a.
NCBI ID   WP_020451191.1    Uniprot ID   A0A6I7TMU9
Organism   Bacillus paralicheniformis strain FA6     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2429165..2439626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D2B33_RS12330 (D2B33_12490) fadH 2430190..2430954 (-) 765 WP_020451195.1 2,4-dienoyl-CoA reductase -
  D2B33_RS12335 (D2B33_12495) - 2431101..2431958 (+) 858 WP_020451194.1 metallophosphoesterase -
  D2B33_RS12340 (D2B33_12500) - 2432136..2432633 (+) 498 WP_020451193.1 L,D-transpeptidase family protein -
  D2B33_RS12345 (D2B33_12505) - 2432722..2434023 (+) 1302 WP_020451192.1 MFS transporter -
  D2B33_RS12350 (D2B33_12510) kre 2434165..2434626 (+) 462 WP_020451191.1 YkyB family protein Regulator
  D2B33_RS12355 (D2B33_12515) - 2434655..2435572 (-) 918 WP_020451190.1 chemotaxis protein -
  D2B33_RS12360 (D2B33_12520) - 2435646..2436965 (-) 1320 WP_020451189.1 MFS transporter -
  D2B33_RS12365 (D2B33_12525) - 2437062..2437586 (-) 525 WP_020451188.1 RDD family protein -
  D2B33_RS22445 - 2437758..2437916 (+) 159 WP_165583461.1 hypothetical protein -
  D2B33_RS12370 (D2B33_12530) - 2438108..2439288 (+) 1181 Protein_2481 aminotransferase A -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17573.37 Da        Isoelectric Point: 10.6730

>NTDB_id=322451 D2B33_RS12350 WP_020451191.1 2434165..2434626(+) (kre) [Bacillus paralicheniformis strain FA6]
MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFASLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPASKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=322451 D2B33_RS12350 WP_020451191.1 2434165..2434626(+) (kre) [Bacillus paralicheniformis strain FA6]
ATGGACGACCATAATCATACGAAAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTTAATCGCCA
TGCAAAAACCGCGACTAATCCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTTAATGAAGGAAAGG
GTAAAAAGGTAGGCCTTCACTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCAGATGTGCTGATTTCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAGCCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCCTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATTAAGGAAAAACCGCTCGTCA
CAAACCGGAAGCGCCCTGCCTCAAAGCCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TMU9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.83

Multiple sequence alignment