Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   D2B33_RS02760 Genome accession   NZ_CP033198
Coordinates   548612..550231 (+) Length   539 a.a.
NCBI ID   WP_122934983.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain FA6     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 543612..555231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D2B33_RS02725 (D2B33_02745) - 543759..544670 (+) 912 WP_020452791.1 polyprenyl synthetase family protein -
  D2B33_RS02730 (D2B33_02750) comX 544642..544812 (+) 171 WP_020452790.1 competence pheromone ComX -
  D2B33_RS02735 (D2B33_02755) - 544941..545651 (+) 711 WP_183163973.1 hypothetical protein -
  D2B33_RS02740 (D2B33_02760) - 545645..546238 (-) 594 WP_020452312.1 TetR/AcrR family transcriptional regulator -
  D2B33_RS02745 (D2B33_02765) - 546327..547037 (+) 711 WP_020452313.1 GAP family protein -
  D2B33_RS02750 (D2B33_02770) - 547069..547281 (+) 213 WP_040037657.1 hypothetical protein -
  D2B33_RS02755 (D2B33_02775) - 547274..548596 (+) 1323 WP_020452314.1 ISL3 family transposase -
  D2B33_RS02760 (D2B33_02780) comP 548612..550231 (+) 1620 WP_122934983.1 sensor histidine kinase Regulator
  D2B33_RS02765 (D2B33_02785) comA 550318..550956 (+) 639 WP_003184849.1 response regulator transcription factor Regulator
  D2B33_RS02770 (D2B33_02790) - 550973..551362 (+) 390 WP_009329508.1 hotdog fold thioesterase -
  D2B33_RS02775 (D2B33_02795) mnhG 551399..551773 (-) 375 WP_023856153.1 monovalent cation/H(+) antiporter subunit G -
  D2B33_RS02780 (D2B33_02800) - 551757..552041 (-) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  D2B33_RS02785 (D2B33_02805) - 552041..552517 (-) 477 WP_020452787.1 Na+/H+ antiporter subunit E -
  D2B33_RS02790 (D2B33_02810) - 552523..554001 (-) 1479 WP_020452786.1 Na+/H+ antiporter subunit D -
  D2B33_RS02795 (D2B33_02815) - 553994..554335 (-) 342 WP_020452785.1 Na(+)/H(+) antiporter subunit C -
  D2B33_RS02800 (D2B33_02820) - 554335..554766 (-) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 539 a.a.        Molecular weight: 62385.40 Da        Isoelectric Point: 6.7035

>NTDB_id=322423 D2B33_RS02760 WP_122934983.1 548612..550231(+) (comP) [Bacillus paralicheniformis strain FA6]
MIRIPLKSINLLSFFISTVIVFILITYALIKFKYSQQSYLLKILMLMNFIALVPFLFFYVLPMLVFGDYIFSAIVVSPFL
LLIPLSLVYQFMSNKIYDIEFLIGRLKYYSFLAIIPTSLIITILAIVKHQEGEFFTVQVTIFTYLIMVGVFYLKEIIDFR
FRLKRFSEKFNYQDSIFKFTQTIRTFTSLNQVLMELKQIVLDVLLVNNIYMLKVKNDGSVSMLENDAEEKPWIPYEQEVT
KVITDIGKIVEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLEHVKKEG
PNPAWLNKLMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSTVIQTTRETCQ
ELRPQLLYDLGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSKANEVLIMLVCIKE
KVVLHYEDDGIGFDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMEL

Nucleotide


Download         Length: 1620 bp        

>NTDB_id=322423 D2B33_RS02760 WP_122934983.1 548612..550231(+) (comP) [Bacillus paralicheniformis strain FA6]
ATAATCCGAATACCCCTAAAAAGTATTAACTTATTGTCGTTCTTTATTTCGACGGTTATTGTTTTTATTCTGATTACATA
TGCCTTAATTAAATTCAAGTATTCTCAACAGTCCTACTTATTGAAAATATTAATGTTGATGAACTTCATTGCATTGGTAC
CTTTTTTGTTTTTCTATGTACTTCCTATGCTGGTCTTTGGCGATTATATTTTCTCGGCCATTGTTGTGTCCCCGTTTCTG
TTGCTGATTCCTTTATCTTTGGTATATCAATTTATGTCTAATAAAATATATGATATTGAATTTTTAATTGGTCGATTGAA
ATATTATAGTTTTTTAGCGATAATTCCAACTTCTTTAATTATTACTATTTTAGCCATTGTTAAGCATCAAGAAGGAGAAT
TTTTCACAGTACAGGTTACAATCTTTACATATCTTATCATGGTAGGCGTTTTCTATTTAAAAGAAATTATTGATTTTCGC
TTTCGGCTAAAGCGCTTTTCAGAAAAATTTAACTACCAGGATAGTATTTTTAAATTTACTCAAACCATTCGAACATTTAC
GTCTTTAAATCAAGTTTTAATGGAGTTAAAACAAATCGTTTTGGACGTGCTTCTTGTTAATAATATTTATATGCTCAAAG
TAAAAAACGATGGATCGGTATCGATGCTAGAGAATGATGCAGAAGAAAAACCGTGGATCCCGTACGAACAAGAAGTAACC
AAGGTCATCACCGACATCGGCAAAATCGTCGAAGTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACTTC
TTATGTCATGCTGTGTTTGTCGGTTTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCGTGGCTTGAGACGCTGGCGT
TTTATACGAGTGTTTCCCTGGAAAACGTCTTGAAAATCGGCGAGCTGATGGAGCATCTGGAACATGTGAAAAAAGAAGGG
CCGAATCCGGCGTGGCTGAATAAATTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTGGCCCGTGATCTTCATGA
TTCTGTGCTGCAGGACATGATTTCCTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTA
CGAATCAAATCAGGCAAAGGCTCATCAATATGAATGAGCAAATGTCCACCGTCATCCAGACGACAAGGGAAACGTGTCAG
GAGCTGAGGCCGCAGCTGTTGTACGATCTCGGACTGGTCAAAGCCCTTTCGAAACTGGCGGCACAGCATCAGGAGTCCTC
ATCGATCGATAAGATCCGCCTCAATACGGAAAGGTTCTCAAAGGTGCTCGACCTGGACACGCAGCTGAATTTGTACAGAA
TTGTGCAGGAGCTTTTAAGCAATGCGGTTAAACACTCGAAAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAA
AAAGTTGTTCTTCATTATGAAGATGACGGCATCGGTTTTGATCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCT
GTCGGGTATTCGCGAGCGAGTCCGCGCGCTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTCAGGGTCG
CCATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(450-537)

Histidine kinase (HisKA_3)

(338-407)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

60.187

99.258

0.597

Multiple sequence alignment