Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FC605_RS20745 Genome accession   NZ_CP040528
Coordinates   4010680..4011474 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain PR10     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4005680..4016474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FC605_RS20720 (FC605_20720) - 4006793..4007476 (-) 684 WP_038428106.1 response regulator transcription factor -
  FC605_RS20725 (FC605_20725) - 4007688..4008587 (+) 900 WP_080530014.1 PepSY domain-containing protein -
  FC605_RS20730 (FC605_20730) - 4008749..4009249 (+) 501 WP_080530015.1 PepSY domain-containing protein -
  FC605_RS20735 (FC605_20735) - 4009246..4009375 (-) 130 Protein_4010 hypothetical protein -
  FC605_RS20740 (FC605_20740) htrA 4009396..4010598 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  FC605_RS20745 (FC605_20745) vicX 4010680..4011474 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  FC605_RS20750 (FC605_20750) walI 4011496..4012338 (-) 843 WP_029318542.1 WalRK two-component regulatory system regulator WalI -
  FC605_RS20755 (FC605_20755) walH 4012325..4013692 (-) 1368 WP_080530100.1 WalRK two-component regulatory system regulator WalH -
  FC605_RS20760 (FC605_20760) walK 4013682..4015517 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  FC605_RS20765 (FC605_20765) walR 4015525..4016232 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=321986 FC605_RS20745 WP_003226939.1 4010680..4011474(-) (vicX) [Bacillus subtilis strain PR10]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=321986 FC605_RS20745 WP_003226939.1 4010680..4011474(-) (vicX) [Bacillus subtilis strain PR10]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AACGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTAAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTTTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment