Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | ECS88_RS05985 | Genome accession | NC_011742 |
| Coordinates | 1021015..1021644 (+) | Length | 209 a.a. |
| NCBI ID | WP_000839136.1 | Uniprot ID | A0A0D8W3X3 |
| Organism | Escherichia coli S88 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1016015..1026644
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECS88_RS05960 (ECS88_0976) | ycbZ | 1016415..1018175 (-) | 1761 | WP_000156501.1 | Lon protease family protein | - |
| ECS88_RS05965 (ECS88_0977) | matP | 1018361..1018813 (+) | 453 | WP_000877153.1 | macrodomain Ter protein MatP | - |
| ECS88_RS05970 (ECS88_0978) | ompA | 1018891..1019931 (-) | 1041 | WP_001350588.1 | porin OmpA | - |
| ECS88_RS05980 (ECS88_0980) | sulA | 1020287..1020796 (-) | 510 | WP_000287750.1 | SOS-induced cell division inhibitor SulA | - |
| ECS88_RS05985 (ECS88_0981) | sxy/tfoX | 1021015..1021644 (+) | 630 | WP_000839136.1 | CRP-S regulon transcriptional coactivator Sxy | Regulator |
| ECS88_RS05990 (ECS88_0982) | yccS | 1021607..1023769 (-) | 2163 | WP_000875041.1 | YccS family putative transporter | - |
| ECS88_RS05995 (ECS88_0983) | yccF | 1023779..1024225 (-) | 447 | WP_001261236.1 | YccF domain-containing protein | - |
| ECS88_RS06000 (ECS88_0984) | helD | 1024348..1026402 (+) | 2055 | WP_001514132.1 | DNA helicase IV | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24128.06 Da Isoelectric Point: 9.2180
>NTDB_id=32198 ECS88_RS05985 WP_000839136.1 1021015..1021644(+) (sxy/tfoX) [Escherichia coli S88]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAPYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNIRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAPYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNIRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
Nucleotide
Download Length: 630 bp
>NTDB_id=32198 ECS88_RS05985 WP_000839136.1 1021015..1021644(+) (sxy/tfoX) [Escherichia coli S88]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACCGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGTACGCGCAATATTCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACCGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGTACGCGCAATATTCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
99.043 |
100 |
0.99 |