Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   GALLO_RS04455 Genome accession   NC_013798
Coordinates   879554..880036 (+) Length   160 a.a.
NCBI ID   WP_012961790.1    Uniprot ID   -
Organism   Streptococcus gallolyticus UCN34     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 874554..885036
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GALLO_RS04430 (GALLO_0828) - 875215..876003 (+) 789 WP_012961787.1 Nif3-like dinuclear metal center hexameric protein -
  GALLO_RS04435 (GALLO_0829) rfbA 876190..877059 (+) 870 WP_012961788.1 glucose-1-phosphate thymidylyltransferase RfbA -
  GALLO_RS04440 (GALLO_0830) - 877059..877652 (+) 594 WP_009853945.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  GALLO_RS04445 (GALLO_0831) rfbB 877825..878874 (+) 1050 WP_003064218.1 dTDP-glucose 4,6-dehydratase -
  GALLO_RS04450 (GALLO_0832) - 879012..879434 (+) 423 WP_012961789.1 HD domain-containing protein -
  GALLO_RS04455 (GALLO_0833) mutX 879554..880036 (+) 483 WP_012961790.1 NUDIX hydrolase Machinery gene
  GALLO_RS04460 (GALLO_0834) - 880129..881316 (+) 1188 WP_009853948.1 AI-2E family transporter -
  GALLO_RS04465 (GALLO_0835) - 881306..882541 (+) 1236 WP_012961791.1 tetratricopeptide repeat protein -
  GALLO_RS04470 - 882525..882701 (+) 177 WP_009853950.1 hypothetical protein -
  GALLO_RS04475 (GALLO_0836) - 882823..883125 (+) 303 WP_009853951.1 ArsR/SmtB family transcription factor -
  GALLO_RS04480 (GALLO_0837) - 883225..884412 (+) 1188 WP_012961792.1 NADH-dependent flavin oxidoreductase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18755.00 Da        Isoelectric Point: 4.2866

>NTDB_id=32186 GALLO_RS04455 WP_012961790.1 879554..880036(+) (mutX) [Streptococcus gallolyticus UCN34]
MTKLATICYIDNGEALLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECAKREIFEETHFTVKEMDFKGVITFPEFTPGH
DWYTYVFKVTDFEGELISDEESREGTLEWVPYDQVLSKPTWEGDYEIFKWILDDVPFFSAKFTYDDEQRLVDKSVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=32186 GALLO_RS04455 WP_012961790.1 879554..880036(+) (mutX) [Streptococcus gallolyticus UCN34]
ATGACAAAATTAGCAACGATTTGTTATATTGATAATGGTGAAGCGCTTTTGCTTTTACATCGCAATAAGAAACCAAATGA
TGTTCACGAAGGAAAATGGATTTCTGTTGGTGGTAAGCTAGAAGCAGGCGAAACACCAGATGAATGTGCGAAACGTGAGA
TTTTCGAGGAAACGCATTTTACTGTTAAAGAAATGGATTTCAAGGGAGTGATTACGTTCCCAGAATTCACACCAGGGCAT
GATTGGTACACTTATGTTTTCAAGGTAACCGATTTTGAGGGAGAATTGATTTCTGATGAAGAGTCACGTGAAGGAACTTT
AGAGTGGGTGCCTTACGACCAAGTTCTATCAAAACCGACTTGGGAGGGTGACTACGAAATTTTTAAATGGATTCTGGATG
ATGTGCCATTCTTTTCAGCCAAATTTACTTATGACGACGAACAGCGCTTGGTTGATAAAAGCGTGACATTTTATGATAAA
TGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.811

99.375

0.694

Multiple sequence alignment