Detailed information NTG0321853

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: FC605_RS01650
• Genome accession: NZ_CP040528
• Coordinates: 295085..296206 (+)
• Length: 373 a.a.
• NCBI ID: WP_080528887.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PR10
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 290085..301206

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FC605_RS01625 (FC605_01625)	ycdA	290090..291154 (-)	1065	WP_080528885.1	DUF4352 domain-containing protein	-
FC605_RS01630 (FC605_01630)	-	291177..291308 (-)	132	WP_003246334.1	hypothetical protein	-
FC605_RS01635 (FC605_01635)	ycdB	291482..292903 (+)	1422	WP_080528886.1	YcdB/YcdC domain-containing protein	-
FC605_RS01640 (FC605_01640)	ycdC	293090..294451 (+)	1362	WP_080530029.1	YcdB/YcdC domain-containing protein	-
FC605_RS01645 (FC605_01645)	cwlK	294459..294962 (-)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
FC605_RS01650 (FC605_01650)	rapF	295085..296206 (+)	1122	WP_080528887.1	response regulator aspartate phosphatase RapJ	Regulator
FC605_RS01655 (FC605_01655)	ycdF	296313..297089 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
FC605_RS01660 (FC605_01660)	ycdG	297114..298799 (+)	1686	WP_080528888.1	alpha-glucosidase	-
FC605_RS01665 (FC605_01665)	znuA	298987..299946 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
FC605_RS01670 (FC605_01670)	znuC	300002..300697 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44399.35 Da
• Isoelectric Point: 4.9410

>NTDB_id=321853 FC605_RS01650 WP_080528887.1 295085..296206(+) (rapF) [Bacillus subtilis strain PR10]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWKDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=321853 FC605_RS01650 WP_080528887.1 295085..296206(+) (rapF) [Bacillus subtilis strain PR10]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGAATAAAGAGCGCGGCTGAATGGAAGG
ATGACATGTACTTGACGAAATTTCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCTGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (196-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405