Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | D0856_RS22435 | Genome accession | NZ_CP033145 |
| Coordinates | 852555..853652 (+) | Length | 365 a.a. |
| NCBI ID | WP_122071669.1 | Uniprot ID | - |
| Organism | Vibrio owensii strain V180403 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 847555..858652
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0856_RS22405 (D0856_22405) | - | 847862..848851 (+) | 990 | WP_122069786.1 | Gfo/Idh/MocA family oxidoreductase | - |
| D0856_RS22410 (D0856_22410) | - | 848930..850255 (-) | 1326 | WP_122069788.1 | MATE family efflux transporter | - |
| D0856_RS22415 (D0856_22415) | - | 850379..850693 (-) | 315 | WP_005442423.1 | DUF496 family protein | - |
| D0856_RS22420 (D0856_22420) | - | 850932..851135 (+) | 204 | WP_009704769.1 | hypothetical protein | - |
| D0856_RS22425 (D0856_22425) | - | 851229..851882 (+) | 654 | WP_009704768.1 | YceH family protein | - |
| D0856_RS22430 (D0856_22430) | - | 851879..852193 (+) | 315 | WP_020194123.1 | GIY-YIG nuclease family protein | - |
| D0856_RS22435 (D0856_22435) | luxP | 852555..853652 (+) | 1098 | WP_122071669.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| D0856_RS22440 (D0856_22440) | luxQ | 853652..856231 (+) | 2580 | WP_122069790.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | - |
| D0856_RS22445 (D0856_22445) | - | 856291..856953 (-) | 663 | WP_122069793.1 | PilZ domain-containing protein | - |
| D0856_RS22450 (D0856_22450) | - | 857047..857973 (-) | 927 | WP_122069795.1 | DMT family transporter | - |
| D0856_RS22455 (D0856_22455) | - | 858123..858578 (+) | 456 | WP_005442405.1 | Lrp/AsnC family transcriptional regulator | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 41489.93 Da Isoelectric Point: 6.3167
>NTDB_id=321853 D0856_RS22435 WP_122071669.1 852555..853652(+) (luxP) [Vibrio owensii strain V180403]
MNKALLFSLISMVSFSPVTHATQVLNGYWAYQEFLDEFPEQRKLTNALAEAVRERPAPLSKAKKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQINQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKYFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYEAAKASLAKHPDVDFIYACSTDVALGAVDALAELGREDIMVNGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEIVTKADSPERIEALKKRAFRYSDN
MNKALLFSLISMVSFSPVTHATQVLNGYWAYQEFLDEFPEQRKLTNALAEAVRERPAPLSKAKKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQINQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKYFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYEAAKASLAKHPDVDFIYACSTDVALGAVDALAELGREDIMVNGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEIVTKADSPERIEALKKRAFRYSDN
Nucleotide
Download Length: 1098 bp
>NTDB_id=321853 D0856_RS22435 WP_122071669.1 852555..853652(+) (luxP) [Vibrio owensii strain V180403]
ATGAATAAAGCGTTACTATTTTCCTTAATTTCTATGGTGAGTTTTTCTCCAGTTACCCACGCCACTCAAGTGTTGAATGG
GTACTGGGCATATCAAGAATTCTTAGATGAATTTCCTGAGCAGAGAAAACTGACCAATGCGTTGGCGGAAGCCGTTCGAG
AGCGTCCTGCTCCGCTTTCTAAAGCCAAAAAGCGTCCACTCAAAATATCGGTTGTTTATCCAGGGCAACAAGTGTCCGAT
TACTGGGTAAGAAACATCGCTGCATTTGAAAAACGACTAGACAAGTTGAATATCAACTATCAAATCAACCAAGTATTTAC
ACGACCAAATGCCGATATTAAGCAACAGAGCTTGTCATTAATGGAGGCGCTTAAGAGCAAATCCGATTATTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTATTAGATTCCACCAACACCAAATTAATCTTACAAAATATC
ACCACGCCAGTGCGTGAATGGGATAAGCATCAGCCATTTTTATATGTTGGGTTTGACCACGCAGAAGGCAGTCGTGAACT
CGCAACAGAATTCGGAAAGTACTTCCCAAAACACACATATTACAGTGTGCTTTACTTTTCTGAAGGGTACATTAGCGACG
TAAGAGGTGACACTTTCATTCACCAAGTTAACCGTGACAATAACTTTGAGCTACAATCAGCGTACTACACGAAAGCAACC
AAGCAATCCGGCTATGAGGCCGCGAAGGCGAGTTTAGCGAAACACCCAGACGTTGATTTTATTTATGCGTGTTCCACCGA
TGTGGCCTTAGGCGCTGTCGATGCATTGGCTGAGTTGGGTCGCGAAGACATTATGGTTAATGGATGGGGTGGAGGCTCTG
CTGAGCTAGACGCTATTCAAAAAGGCGATTTAGACATTACCGTCATGCGTATGAATGACGATACTGGCATCGCCATGGCA
GAAGCCATTAAGTGGGACTTGGAAGGAAAGCCAGTGCCAACCGTATACTCCGGTGACTTTGAAATTGTCACAAAAGCGGA
TTCACCGGAACGAATCGAAGCGCTTAAAAAGCGTGCATTTAGATATTCAGATAATTGA
ATGAATAAAGCGTTACTATTTTCCTTAATTTCTATGGTGAGTTTTTCTCCAGTTACCCACGCCACTCAAGTGTTGAATGG
GTACTGGGCATATCAAGAATTCTTAGATGAATTTCCTGAGCAGAGAAAACTGACCAATGCGTTGGCGGAAGCCGTTCGAG
AGCGTCCTGCTCCGCTTTCTAAAGCCAAAAAGCGTCCACTCAAAATATCGGTTGTTTATCCAGGGCAACAAGTGTCCGAT
TACTGGGTAAGAAACATCGCTGCATTTGAAAAACGACTAGACAAGTTGAATATCAACTATCAAATCAACCAAGTATTTAC
ACGACCAAATGCCGATATTAAGCAACAGAGCTTGTCATTAATGGAGGCGCTTAAGAGCAAATCCGATTATTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTATTAGATTCCACCAACACCAAATTAATCTTACAAAATATC
ACCACGCCAGTGCGTGAATGGGATAAGCATCAGCCATTTTTATATGTTGGGTTTGACCACGCAGAAGGCAGTCGTGAACT
CGCAACAGAATTCGGAAAGTACTTCCCAAAACACACATATTACAGTGTGCTTTACTTTTCTGAAGGGTACATTAGCGACG
TAAGAGGTGACACTTTCATTCACCAAGTTAACCGTGACAATAACTTTGAGCTACAATCAGCGTACTACACGAAAGCAACC
AAGCAATCCGGCTATGAGGCCGCGAAGGCGAGTTTAGCGAAACACCCAGACGTTGATTTTATTTATGCGTGTTCCACCGA
TGTGGCCTTAGGCGCTGTCGATGCATTGGCTGAGTTGGGTCGCGAAGACATTATGGTTAATGGATGGGGTGGAGGCTCTG
CTGAGCTAGACGCTATTCAAAAAGGCGATTTAGACATTACCGTCATGCGTATGAATGACGATACTGGCATCGCCATGGCA
GAAGCCATTAAGTGGGACTTGGAAGGAAAGCCAGTGCCAACCGTATACTCCGGTGACTTTGAAATTGTCACAAAAGCGGA
TTCACCGGAACGAATCGAAGCGCTTAAAAAGCGTGCATTTAGATATTCAGATAATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
65.11 |
99.726 |
0.649 |