Detailed information NTG0321834

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: D0856_RS14425
• Genome accession: NZ_CP033144
• Coordinates: 2982821..2983828 (+)
• Length: 335 a.a.
• NCBI ID: WP_009707836.1
• Uniprot ID: A0AAP9GE11
• Organism: Vibrio owensii strain V180403
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2977821..2988828

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D0856_RS14395 (D0856_14395)	rplD	2977875..2978476 (-)	602	Protein_2683	50S ribosomal protein L4	-
D0856_RS14400 (D0856_14400)	rplC	2978494..2979123 (-)	630	WP_005435072.1	50S ribosomal protein L3	-
D0856_RS14405 (D0856_14405)	rpsJ	2979138..2979449 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
D0856_RS14410 (D0856_14410)	rpmE	2979896..2980117 (-)	222	WP_005435070.1	50S ribosomal protein L31	-
D0856_RS14420 (D0856_14420)	priA	2980413..2982614 (+)	2202	WP_122068336.1	primosomal protein N'	-
D0856_RS14425 (D0856_14425)	cytR	2982821..2983828 (+)	1008	WP_009707836.1	DNA-binding transcriptional regulator CytR	Regulator
D0856_RS14430 (D0856_14430)	-	2983980..2984531 (+)	552	WP_122068338.1	SPOR domain-containing protein	-
D0856_RS14435 (D0856_14435)	hslV	2984822..2985373 (+)	552	WP_005435051.1	ATP-dependent protease subunit HslV	-
D0856_RS14440 (D0856_14440)	hslU	2985403..2986734 (+)	1332	WP_020196516.1	HslU--HslV peptidase ATPase subunit	-
D0856_RS14445 (D0856_14445)	-	2986911..2987828 (+)	918	WP_005435047.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
D0856_RS14450 (D0856_14450)	rraA	2987904..2988425 (+)	522	WP_039841359.1	ribonuclease E activity regulator RraA	-
D0856_RS14455 (D0856_14455)	zapB	2988534..2988776 (-)	243	WP_005435037.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36959.54 Da
• Isoelectric Point: 5.9796

>NTDB_id=321834 D0856_RS14425 WP_009707836.1 2982821..2983828(+) (cytR) [Vibrio owensii strain V180403]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGINKEEQYSVIADFSFEGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=321834 D0856_RS14425 WP_009707836.1 2982821..2983828(+) (cytR) [Vibrio owensii strain V180403]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCTACGGTATCGCGAGCATTGATGAATCCAGAAAA
AGTCTCTTCATCGACAAGAAAGAGAGTGGAAGATGCCGTACTAGAAGCTGGTTATTCACCGAATTCATTAGCTCGTAACT
TACGCAGAAATGAATCAAAGACCATTGTCACTATCGTCCCAGACATTTGCGACCCGTACTTCTCTGAGATTATTCGCGGC
ATTGAAGACGCAGCAATGGAACACGGTTACCTTGTTCTACTTGGTGATAGCGGTCAGCAGAAAAAGCGTGAAAGCTCATT
TGTAAACTTGGTTTTCACCAAGCAAGCTGATGGCATGCTACTTCTCGGAACCGATCTGCCTTTTGATGTCAGCAAGCCAG
AACAGAAAAACCTACCACCTATGGTGATGGCGTGTGAGTTCGCACCAGAGCTTGAACTGCCAACGGTGCACATCGATAAC
CTTACTTCTGCGTTCGAGGCTGTAAATTACCTGACTCAACTTGGCCATAAGCGTATTGCTCAAATCTCTGGTCCAGACAC
TGCGGTACTTTGTCAGTTCCGCCAACAGGGTTACCAGCAAGCACTTCGTCGCGCAGGCATTAATAAAGAAGAACAGTACA
GCGTAATCGCAGACTTTTCTTTTGAAGGCGGCGTGCAAGCAGTCCGTAAACTTCTTGAGTTACCGGAACCTCCAACCGCA
CTCTTCTGCCACTGTGACACCATGGCGATTGGCGCCATTCAAGAAGCGAAACGTCTAGGTTTACGTATTCCTCAAGATTT
ATCGATCGTGGGCTTTGATGACATTCAGTTCGCACAATACTGCGATCCACCGTTAACGACTATCTCTCAACCTCGTTATG
AAATCGGTCGTCAAGCCATGTTGATGATGCTTGAACTATTAAAAGGTCATGACGTTCATTCCGGCTCTCGTTTACTAGAG
ACTAAGTTGGTTGTTCGTGGCAGCGCAGCGCCACCGCCATTGCGTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	96.386	99.104	0.955
cytR	Vibrio cholerae C6706	90.361	99.104	0.896