Detailed information
Bioinformatically predicted
Overview
| Name | luxO | Type | Regulator |
| Locus tag | D0856_RS03205 | Genome accession | NZ_CP033144 |
| Coordinates | 683238..684641 (+) | Length | 467 a.a. |
| NCBI ID | WP_005439670.1 | Uniprot ID | - |
| Organism | Vibrio owensii strain V180403 | ||
| Function | promote HapR production (predicted from homology) Competence regulation |
||
Genomic Context
Location: 678238..689641
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0856_RS03200 (D0856_03200) | uvrB | 680882..682912 (+) | 2031 | WP_122067215.1 | excinuclease ABC subunit UvrB | - |
| D0856_RS03205 (D0856_03205) | luxO | 683238..684641 (+) | 1404 | WP_005439670.1 | quorum-sensing sigma-54 dependent transcriptional regulator LuxO | Regulator |
| D0856_RS03210 (D0856_03210) | luxU | 684638..684982 (+) | 345 | WP_122067216.1 | quorum-sensing phosphorelay protein LuxU | - |
| D0856_RS03215 (D0856_03215) | - | 685080..685973 (-) | 894 | WP_005439666.1 | YvcK family protein | - |
| D0856_RS03220 (D0856_03220) | moaA | 686271..687259 (+) | 989 | Protein_612 | GTP 3',8-cyclase MoaA | - |
| D0856_RS03225 (D0856_03225) | moaB | 687361..687873 (+) | 513 | WP_005433210.1 | molybdenum cofactor biosynthesis protein B | - |
| D0856_RS03230 (D0856_03230) | moaC | 687900..688376 (+) | 477 | WP_005439664.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| D0856_RS03235 (D0856_03235) | moaD | 688376..688633 (+) | 258 | WP_122067217.1 | molybdopterin synthase sulfur carrier subunit | - |
| D0856_RS03240 (D0856_03240) | moaE | 688635..689090 (+) | 456 | WP_009707279.1 | molybdopterin synthase catalytic subunit MoaE | - |
Sequence
Protein
Download Length: 467 a.a. Molecular weight: 52180.70 Da Isoelectric Point: 5.8849
>NTDB_id=321822 D0856_RS03205 WP_005439670.1 683238..684641(+) (luxO) [Vibrio owensii strain V180403]
MQQITEGQKSRYLLMVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIPDLILLDLRLPDMTGMDVLHAVKKSH
PDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKATKLKNEADNPGNQNYQGFIGSSQTMQQVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAANDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGEDVIEIAYSLLGYMSHEEGKSFIRFAQDVIERFNSYEWPGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPVVRQS
ISKFIEPEIMTVSDIMPLWMTEKMAIEQAIQACDGNIPRAAGYLDVSPSTIYRKLQAWNSKDEKQNV
MQQITEGQKSRYLLMVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIPDLILLDLRLPDMTGMDVLHAVKKSH
PDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKATKLKNEADNPGNQNYQGFIGSSQTMQQVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAANDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGEDVIEIAYSLLGYMSHEEGKSFIRFAQDVIERFNSYEWPGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPVVRQS
ISKFIEPEIMTVSDIMPLWMTEKMAIEQAIQACDGNIPRAAGYLDVSPSTIYRKLQAWNSKDEKQNV
Nucleotide
Download Length: 1404 bp
>NTDB_id=321822 D0856_RS03205 WP_005439670.1 683238..684641(+) (luxO) [Vibrio owensii strain V180403]
ATGCAACAAATAACAGAAGGTCAAAAGTCTCGTTATCTACTAATGGTAGAAGACACCGCATCCGTTGCGGCATTGTACCG
TTCTTACCTGACGCCTCTTGGCATCGATATTAATATTGTTGGAACAGGCAGAGACGCCATCGAAAGCCTGAACCATCGAA
TTCCCGACCTGATTCTGCTCGATCTCCGCTTACCTGATATGACGGGGATGGACGTATTGCACGCGGTGAAGAAAAGCCAC
CCAGACGTGCCAATCATCTTTATGACTGCTCATGGCTCTATCGATACAGCGGTAGAAGCGATGCGTCATGGTTCTCAAGA
CTTCTTAATCAAACCATGTGAAGCCGACCGTCTTCGTGTCACGGTGAACAACGCAATTCGCAAAGCAACCAAGCTTAAGA
ATGAAGCGGATAACCCGGGTAACCAAAATTACCAAGGCTTTATCGGCAGTAGCCAAACCATGCAGCAGGTTTACCGAACC
ATTGACTCCGCAGCGAGCAGTAAAGCGAGTATTTTCATCACAGGTGAAAGTGGTACTGGTAAAGAAGTGTGTGCCGAAGC
CATTCACGCAGCAAGCAAACGTGGTGATAAGCCGTTTATCGCTATTAACTGTGCTGCGATCCCAAAAGATCTAATTGAAA
GTGAATTGTTTGGTCACGTAAAAGGCGCGTTTACCGGTGCTGCGAATGATCGCCAAGGTGCGGCTGAGCTTGCCGATGGT
GGCACGCTGTTCCTTGATGAATTGTGTGAAATGGACTTAGATCTTCAAACTAAGTTATTGCGCTTTATCCAAACGGGTAC
TTTCCAAAAAGTGGGCTCTTCAAAGATGAAGAGTGTCGACGTGCGATTTGTATGTGCGACCAACCGCGACCCATGGAAAG
AAGTGCAAGAAGGCCGTTTCCGTGAAGACTTGTACTACCGTTTGTACGTGATTCCTTTGCACCTTCCACCGTTACGTGAG
CGCGGCGAAGACGTGATTGAAATCGCGTACTCGCTACTGGGCTATATGTCTCACGAGGAAGGCAAAAGTTTTATCCGTTT
TGCACAAGATGTGATTGAACGTTTCAACAGTTACGAATGGCCGGGTAACGTTCGTCAGTTGCAAAACGTACTGCGTAATA
TCGTTGTACTGAACAACGGCAAAGAAATTACTCTGGACATGCTGCCACCACCACTGAATCAACCGGTGGTTCGTCAATCG
ATTTCAAAATTTATTGAACCTGAAATCATGACGGTGTCAGACATTATGCCGCTTTGGATGACTGAAAAAATGGCCATCGA
GCAGGCGATTCAGGCGTGTGACGGCAACATTCCACGCGCTGCGGGCTACCTAGATGTCAGCCCATCAACGATTTATCGCA
AGTTGCAAGCTTGGAATAGCAAGGACGAAAAACAGAACGTATGA
ATGCAACAAATAACAGAAGGTCAAAAGTCTCGTTATCTACTAATGGTAGAAGACACCGCATCCGTTGCGGCATTGTACCG
TTCTTACCTGACGCCTCTTGGCATCGATATTAATATTGTTGGAACAGGCAGAGACGCCATCGAAAGCCTGAACCATCGAA
TTCCCGACCTGATTCTGCTCGATCTCCGCTTACCTGATATGACGGGGATGGACGTATTGCACGCGGTGAAGAAAAGCCAC
CCAGACGTGCCAATCATCTTTATGACTGCTCATGGCTCTATCGATACAGCGGTAGAAGCGATGCGTCATGGTTCTCAAGA
CTTCTTAATCAAACCATGTGAAGCCGACCGTCTTCGTGTCACGGTGAACAACGCAATTCGCAAAGCAACCAAGCTTAAGA
ATGAAGCGGATAACCCGGGTAACCAAAATTACCAAGGCTTTATCGGCAGTAGCCAAACCATGCAGCAGGTTTACCGAACC
ATTGACTCCGCAGCGAGCAGTAAAGCGAGTATTTTCATCACAGGTGAAAGTGGTACTGGTAAAGAAGTGTGTGCCGAAGC
CATTCACGCAGCAAGCAAACGTGGTGATAAGCCGTTTATCGCTATTAACTGTGCTGCGATCCCAAAAGATCTAATTGAAA
GTGAATTGTTTGGTCACGTAAAAGGCGCGTTTACCGGTGCTGCGAATGATCGCCAAGGTGCGGCTGAGCTTGCCGATGGT
GGCACGCTGTTCCTTGATGAATTGTGTGAAATGGACTTAGATCTTCAAACTAAGTTATTGCGCTTTATCCAAACGGGTAC
TTTCCAAAAAGTGGGCTCTTCAAAGATGAAGAGTGTCGACGTGCGATTTGTATGTGCGACCAACCGCGACCCATGGAAAG
AAGTGCAAGAAGGCCGTTTCCGTGAAGACTTGTACTACCGTTTGTACGTGATTCCTTTGCACCTTCCACCGTTACGTGAG
CGCGGCGAAGACGTGATTGAAATCGCGTACTCGCTACTGGGCTATATGTCTCACGAGGAAGGCAAAAGTTTTATCCGTTT
TGCACAAGATGTGATTGAACGTTTCAACAGTTACGAATGGCCGGGTAACGTTCGTCAGTTGCAAAACGTACTGCGTAATA
TCGTTGTACTGAACAACGGCAAAGAAATTACTCTGGACATGCTGCCACCACCACTGAATCAACCGGTGGTTCGTCAATCG
ATTTCAAAATTTATTGAACCTGAAATCATGACGGTGTCAGACATTATGCCGCTTTGGATGACTGAAAAAATGGCCATCGA
GCAGGCGATTCAGGCGTGTGACGGCAACATTCCACGCGCTGCGGGCTACCTAGATGTCAGCCCATCAACGATTTATCGCA
AGTTGCAAGCTTGGAATAGCAAGGACGAAAAACAGAACGTATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxO | Vibrio cholerae strain A1552 |
86.384 |
95.931 |
0.829 |