Detailed information NTG0321821

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: D0856_RS00595
• Genome accession: NZ_CP033144
• Coordinates: 124750..128136 (-)
• Length: 1128 a.a.
• NCBI ID: WP_005439415.1
• Uniprot ID: A0A812FE66
• Organism: Vibrio owensii strain V180403
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 119750..133136

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D0856_RS00580 (D0856_00580)	-	120046..121071 (-)	1026	WP_005439412.1	ABC transporter permease	-
D0856_RS00585 (D0856_00585)	-	121074..122060 (-)	987	WP_005425282.1	ABC transporter permease	-
D0856_RS00590 (D0856_00590)	-	122231..123913 (-)	1683	WP_020196582.1	ABC transporter substrate-binding protein	-
D0856_RS00595 (D0856_00595)	chiS	124750..128136 (-)	3387	WP_005439415.1	response regulator	Regulator
D0856_RS00605 (D0856_00605)	rsmC	128365..129390 (-)	1026	WP_122067029.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
D0856_RS00610 (D0856_00610)	-	129467..130552 (-)	1086	WP_009707537.1	AI-2E family transporter	-
D0856_RS00620 (D0856_00620)	hemL	130911..132206 (-)	1296	WP_009707535.1	glutamate-1-semialdehyde 2,1-aminomutase	-
D0856_RS00625 (D0856_00625)	erpA	132453..132794 (+)	342	WP_005439421.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127383.21 Da
• Isoelectric Point: 5.4431

>NTDB_id=321821 D0856_RS00595 WP_005439415.1 124750..128136(-) (chiS) [Vibrio owensii strain V180403]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFAAQETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGHDIDEARENAQHRYIKGSGDQIKTSILPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDIDGNVTYSINKDDNYGTNLLTGRYKETALGRTFKRLSEDVSARRKVNEDYTPVVVSDFDIENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIAEINRDSSIETLLVGSDHKPRTINTKQEDIQNSLEIVDKALAGDTEVGTYSNRLGEE
MIAAFAPIETRGLTWALVVQLPEKEAFARVHQLEKLFVIAMLIAIVLVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TTFNTERKDEIGRLAISFERMQRSIREKIQTIKQQNEELESNIKLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLVSGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSGHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISAMVVDDQVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQATQSLAARGHFQIPEANFENNDDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTISDGPETLALIEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLTKPFNKQELAARIQAHLTASKAEMRHIENKLLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQLKRSSADELIAPKFLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSCYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELLREVLVDTMTHA
LEYWESVTGETKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KMQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=321821 D0856_RS00595 WP_005439415.1 124750..128136(-) (chiS) [Vibrio owensii strain V180403]
ATGTTTAAATTCTACAAAAAGCAGAAATTTAAGCGCCTGCAAAGCACGCTAATGACCGCATTTTTGGTTCTTAGTATTAC
GCCCCTGACGATCACTGCGATTTTCTTCCTGCAATCACACAGTAAAGATCTCCAAGAGCAGAGTACATCGCATCTACTCT
CTGTTCGTGATACTAAGCAGCAGCAGATCATTGACTACTTCGCTGCGCAAGAAACGGAAGTGATGGGCTTCGTACGCTCA
GAACTTGCCTATGCCAGTGGCGGACGCTTCTACGGCTTGGTCAACGCATTTAGCCGTTTAGGGCACGATATTGACGAAGC
GAGAGAAAACGCACAGCACCGCTACATCAAAGGCAGTGGCGATCAAATCAAAACGTCGATTTTGCCAGAGTCGTCCAACT
ATGTTGGCAGTGAACGCTACCGCCTACTCCACAAGCGCTACCATTGGGCGTACCTAGAACTGCTGAAACGTTCTGATTTC
AATGATATTTTGTTGGTCGACATTGATGGCAATGTCACGTACTCCATCAATAAAGATGACAACTACGGCACAAACCTACT
AACCGGTCGCTATAAAGAGACGGCGTTAGGTCGTACCTTTAAACGTTTATCAGAAGACGTCAGTGCACGCCGAAAAGTCA
ATGAAGATTACACCCCAGTGGTGGTGTCTGACTTTGATATCGAAAACGGAAAGCAAGTTGCTTGGTTAGGTGCGCCTATT
GTTCAGCAAGGCTACCTCCACAGTTACGCTATGTTCCGTTTGCCAAATAACGGCATTACCAAGCTTATTGCGGAAATTAA
CCGTGATTCATCCATTGAAACCTTGCTTGTTGGTAGTGACCACAAACCTAGAACCATCAATACCAAACAAGAAGATATCC
AAAACAGCTTAGAAATCGTGGATAAAGCGTTGGCCGGTGACACTGAAGTAGGTACTTACAGTAACCGCTTAGGTGAAGAG
ATGATTGCGGCGTTTGCGCCAATTGAAACTCGTGGCCTAACTTGGGCGCTAGTCGTGCAACTTCCGGAAAAAGAAGCCTT
TGCGCGTGTCCACCAGCTTGAAAAACTGTTTGTGATTGCGATGTTAATTGCGATCGTATTGGTAGTTATCGCCTCACATT
ACTTATCGAACTTCATCACTTCACCACTGCTTAAACTTACTTGGGCAGCAGAGAAAGTGTCTGCAGGTGATTTGGATGAA
ACGACCTTTAACACCGAACGAAAAGACGAGATTGGGCGTCTTGCGATCAGCTTTGAGCGCATGCAACGCTCAATTCGTGA
AAAGATTCAAACCATCAAACAGCAAAATGAAGAGTTAGAAAGCAACATCAAGCTAATCCAAAAGCAAAACGAAGAATTAC
AGCTGGCTGATAAACTGAAAGATGAGTTCCTTGCGACAACCTCCCATGAACTTCGCACGCCATTACACGGTATGGTTGGT
ATTGCGGAAACCTTGGTATCTGGCGCAAATGGGGCAATTCCGGCTAGCCAGAAGTATCAATTGGACATCATCATCAAGAG
TGGTCAGCGCCTAGCGAACCTCGTTGATGACTTATTGGATTACCACAAGATGCGCTATGGCAGCATGGATATCCAAAAGT
CAGCAGTGAGTTTAGCAAGTGCCACACGCTTAGTATTAGAGCTTTCCGGTCACCTATTGGGTAACAAGACTATCCGCATC
ATTAACCAAGTGCCTGCGGATTTGAAAGCTGTCTCAGCGGATCCTCAGCGCTTAGAACAAGTGCTGTACAATTTGATCGG
TAATGCCATCAAGTACACCTCTGAAGGTAAGATCGTCATTTCAGCAATGGTTGTTGACGATCAAGTTCGAGTGCAAGTCG
TGGATACAGGTCAAGGCATCCCAGCAGAGCATCTAGAACATATCTTCGAACCTCTGATTCAAGCAGGTCAAGACGCAAGC
CGCTACCGTCAAGGTGCAGGACTGGGTCTATCAATCAGCCGTCAACTTATTGAGTTGATGGGCGGGTCATTGTATGTGAG
CAGCCAACCTATGGTAGGCACCACATTCAGCTTTACCCTGCCGCTGGCAAGTGAAGAAGAGATCCAAGCAACACAAAGCC
TTGCCGCTCGTGGGCACTTCCAAATCCCCGAGGCAAATTTTGAGAACAACGATGACTTGTCTCTGCCAGAGAACCCAGAC
GGTCCATTGCTTTACGTTGCCGATGATGAACCAGTTAACTTGCGCGTTCTAGAAAGCTTCCTAAGGTTGGAAGGCTATCG
CGTTCGCACGATTTCTGATGGTCCAGAAACACTGGCGTTGATTGAACAAGAAAAGCCAGAACTGCTTTTATTGGACATCA
TGATGCCGGGGATGAGCGGTTATCAAGTGTGTAGCGAGCTTCGTGAAACTTACGATCATGCAGAGCTGCCAATCATCATG
CTAACCGCATTAAGCCAAACAGAGGACCGAGTGAGAGGCTTTGAAGCGGGCGCGAATGATTACCTGACAAAACCATTCAA
CAAACAAGAGCTAGCGGCACGTATTCAGGCGCACCTAACGGCAAGTAAAGCGGAAATGCGACACATCGAAAACAAGTTAT
TAGAGTCGGAACTGCGCCAACGTGCAGAAGTCGAAGCGAGCTTGTTGGAGACCCAAGGCCGATTGCTAGAGCAACTAGAA
TCTGCACCAGAAGCCATTATTTGTCTTCGTGAAGATCAACGTATTCGCTTTGCTAATGAAGCGGCCTGTAAGCTGTTTAA
ACGCAGCTTAGAACAGTTGAAGCGCTCTTCAGCAGACGAATTGATCGCACCTAAATTCCTGACGGTTAAGCAGCCTCACT
ACTGTGGCAAGATTGATATCTACATTGAAGATATTCGCCAAAACATCGAAGCCGACATTCTAAAACTTCCAGAAGGCTCT
GGTTTGGATGTGATGTACATCTTTAATGTCGGCGGCGGTGCTAACGCTGCTCGTATCCACAACCTAGAGACGGCAGTTGA
AGTGCTTTCATGCTACGCATTCGATGGCGACAAAGACCAACTTCAGAAGCTAAAAGAGCTTGGCGGAGAGTTTACACGCT
TGGCAGATAAAGCTTTGGGTAACAAGAAAGACAAACAAGAGCTTCTTCGTGAGGTTCTTGTCGATACCATGACCCATGCA
TTGGAATACTGGGAGTCTGTTACCGGAGAAACCAAGTTTGCGTTTGCTGAGCAAAGTGGCTTGTGGCGTGTTTACCTAGA
CCGCAGTACCTTGCAGACCCGTACCCTAGATAAATACATGCGTATCGAGACATTACCTAAAACACCACGTTGGAGAACGG
TATTAAGCTCGATTGAGTTTATCTTGGAGCACTGTAAAGAACAGAGCCCAGAACGTGCATACATTGAAGCTCAGCGCGAC
AAAATGCAGAGACTTTTAACAAGCTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

3D structure

• AlphaFold DB: A0A812FE66

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.528	100	0.766