Detailed information NTG0321756

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: D0812_RS16075
• Genome accession: NZ_CP033137
• Coordinates: 3392122..3393129 (+)
• Length: 335 a.a.
• NCBI ID: WP_009707836.1
• Uniprot ID: A0AAP9GE11
• Organism: Vibrio owensii strain 1700302
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3387122..3398129

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D0812_RS16045 (D0812_16045)	rplD	3387166..3387768 (-)	603	WP_005435074.1	50S ribosomal protein L4	-
D0812_RS16050 (D0812_16050)	rplC	3387786..3388415 (-)	630	WP_005435072.1	50S ribosomal protein L3	-
D0812_RS16055 (D0812_16055)	rpsJ	3388430..3388741 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
D0812_RS16060 (D0812_16060)	rpmE	3389197..3389418 (-)	222	WP_005435070.1	50S ribosomal protein L31	-
D0812_RS16070 (D0812_16070)	priA	3389714..3391915 (+)	2202	WP_054823061.1	primosomal protein N'	-
D0812_RS16075 (D0812_16075)	cytR	3392122..3393129 (+)	1008	WP_009707836.1	DNA-binding transcriptional regulator CytR	Regulator
D0812_RS16080 (D0812_16080)	-	3393281..3393832 (+)	552	WP_054823062.1	SPOR domain-containing protein	-
D0812_RS16085 (D0812_16085)	hslV	3394123..3394674 (+)	552	WP_005435051.1	ATP-dependent protease subunit HslV	-
D0812_RS16090 (D0812_16090)	hslU	3394704..3396035 (+)	1332	WP_054823063.1	HslU--HslV peptidase ATPase subunit	-
D0812_RS16095 (D0812_16095)	-	3396841..3397758 (+)	918	WP_054823064.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36959.54 Da
• Isoelectric Point: 5.9796

>NTDB_id=321756 D0812_RS16075 WP_009707836.1 3392122..3393129(+) (cytR) [Vibrio owensii strain 1700302]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGINKEEQYSVIADFSFEGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=321756 D0812_RS16075 WP_009707836.1 3392122..3393129(+) (cytR) [Vibrio owensii strain 1700302]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCTACGGTATCGCGAGCATTGATGAATCCAGAAAA
AGTCTCTTCATCGACAAGAAAGAGAGTGGAAGATGCCGTACTAGAAGCTGGTTATTCACCGAATTCATTAGCTCGTAACT
TACGCAGAAATGAATCAAAGACCATTGTCACTATCGTCCCAGACATTTGCGACCCGTACTTCTCTGAGATTATTCGCGGC
ATTGAAGACGCAGCAATGGAACACGGTTACCTTGTTCTACTTGGTGATAGCGGTCAGCAGAAAAAGCGTGAAAGCTCATT
TGTAAACTTAGTCTTCACCAAACAAGCTGATGGCATGCTGCTTCTAGGAACCGACCTGCCTTTTGATGTCAGCAAGCCGG
AACAGAAAAACCTACCACCTATGGTAATGGCGTGTGAGTTCGCACCAGAACTTGAATTGCCAACGGTGCACATCGATAAC
CTTACTTCTGCGTTCGAGGCTGTAAATTACCTGACTCAACTTGGCCATAAGCGTATTGCTCAAATCTCTGGTCCAGACAC
TGCGGTACTTTGTCAGTTCCGCCAACAGGGTTACCAGCAAGCACTTCGTCGCGCAGGCATTAATAAAGAAGAGCAATACA
GCGTAATCGCTGACTTCTCTTTTGAAGGTGGCGTGCAAGCAGTCCGTAAACTTCTTGAGTTACCGGAACCGCCAACCGCA
CTCTTCTGCCACTGTGACACCATGGCAATTGGTGCGATTCAAGAAGCGAAACGTCTAGGCTTACGTATTCCTCAAGATTT
ATCGATCGTGGGCTTTGATGACATTCAGTTCGCACAATACTGCGATCCACCGTTAACGACTATCTCCCAACCTCGTTATG
AAATCGGCCGTCAAGCAATGTTAATGATGCTTGAACTATTGAAAGGCCATGACGTTCATTCCGGCTCTCGTTTACTAGAG
ACTAAGTTGGTTGTTCGTGGCAGCGCAGCGCCACCGCCATTGCGTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	96.386	99.104	0.955
cytR	Vibrio cholerae C6706	90.361	99.104	0.896