Detailed information NTG0321743

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: D0812_RS03280
• Genome accession: NZ_CP033137
• Coordinates: 662279..665665 (-)
• Length: 1128 a.a.
• NCBI ID: WP_054823985.1
• Uniprot ID: A0AAP9G9U2
• Organism: Vibrio owensii strain 1700302
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 657279..670665

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D0812_RS03265 (D0812_03265)	-	657575..658600 (-)	1026	WP_005439412.1	ABC transporter permease	-
D0812_RS03270 (D0812_03270)	-	658603..659589 (-)	987	WP_005425282.1	ABC transporter permease	-
D0812_RS03275 (D0812_03275)	-	659760..661442 (-)	1683	WP_020196582.1	ABC transporter substrate-binding protein	-
D0812_RS03280 (D0812_03280)	chiS	662279..665665 (-)	3387	WP_054823985.1	response regulator	Regulator
D0812_RS03290 (D0812_03290)	rsmC	665894..666919 (-)	1026	WP_054823984.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
D0812_RS03295 (D0812_03295)	-	666996..668081 (-)	1086	WP_009707537.1	AI-2E family transporter	-
D0812_RS03305 (D0812_03305)	hemL	668440..669735 (-)	1296	WP_054823983.1	glutamate-1-semialdehyde 2,1-aminomutase	-
D0812_RS03310 (D0812_03310)	erpA	669982..670323 (+)	342	WP_005439421.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127382.23 Da
• Isoelectric Point: 5.5013

>NTDB_id=321743 D0812_RS03280 WP_054823985.1 662279..665665(-) (chiS) [Vibrio owensii strain 1700302]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFAAQETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGHDIDEARENAQHRYIKGSGDQIKTSILPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDIDGNVTYSINKDDNYGTNLLTGRYKETALGRTFKRLSEDVSARRKVNEDYTPVVVSDFDIENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIAEINRDSSIETLLVGSDHKPRTINTKQEDIQNSLEIVDKALAGDTEVGTYSNRLGEE
MIAAFAPIETRGLTWALVVQLPEKEAFARVHQLEKLFVIAMLIAIVLVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TTFNTERKDEIGRLAISFERMQRSIREKIQTIKQQNEELESNIKLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLVSGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSGHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISAMVVDDQVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQATQSLAARGHFQIPEANFENNDDLSLPENPN
GPLLYVADDEPVNLRVLESFLRLEGYRVRTISDGPETLALIEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLTKPFNKQELAARIQAHLTASKAEMRHIENKLLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQLKRSSADELIAPKFLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSCYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELLREVLVDTMTHA
LEYWESVTGETKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KMQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=321743 D0812_RS03280 WP_054823985.1 662279..665665(-) (chiS) [Vibrio owensii strain 1700302]
ATGTTTAAATTCTACAAAAAGCAGAAATTTAAGCGCCTGCAAAGCACGCTAATGACCGCATTTTTGGTTCTTAGTATTAC
GCCCCTGACGATCACTGCGATTTTCTTCCTGCAATCACACAGTAAAGATCTCCAAGAGCAGAGTACATCGCATCTACTCT
CTGTTCGTGATACTAAGCAGCAGCAGATCATTGACTACTTCGCTGCGCAAGAAACGGAAGTGATGGGCTTCGTACGCTCA
GAACTTGCCTATGCCAGTGGCGGACGCTTCTACGGCTTGGTCAACGCATTTAGCCGTTTAGGGCACGATATTGACGAAGC
GAGAGAAAACGCACAGCACCGCTACATCAAAGGCAGTGGCGATCAAATCAAAACGTCGATTTTGCCGGAGTCGTCCAATT
ATGTTGGTAGCGAACGCTACCGCCTACTCCACAAACGCTACCATTGGGCGTACCTAGAACTGCTAAAACGTTCTGATTTC
AATGATATTTTGTTGGTCGACATTGACGGTAATGTCACGTACTCCATCAATAAAGATGACAACTACGGCACAAACCTACT
AACCGGTCGCTATAAAGAGACGGCGTTGGGTCGTACCTTTAAACGTTTATCAGAAGACGTCAGTGCACGCCGAAAAGTCA
ATGAAGATTACACCCCAGTGGTCGTGTCTGACTTTGATATCGAAAACGGAAAGCAAGTCGCTTGGTTAGGTGCGCCTATT
GTTCAACAAGGCTACCTCCACAGTTACGCTATGTTCCGTTTGCCAAATAACGGTATTACTAAGCTTATTGCGGAAATTAA
CCGCGATTCATCCATTGAAACCTTGCTCGTTGGTAGTGACCACAAACCTAGAACGATCAATACCAAACAAGAAGATATCC
AAAATAGCTTAGAAATCGTGGATAAAGCGTTGGCCGGTGACACAGAAGTAGGTACTTACAGTAACCGCTTAGGTGAAGAG
ATGATTGCGGCGTTTGCGCCAATTGAAACTCGTGGCCTAACTTGGGCGCTAGTCGTGCAACTTCCTGAAAAAGAAGCCTT
TGCACGTGTCCACCAGCTTGAAAAACTGTTTGTGATTGCGATGTTAATTGCGATTGTATTGGTAGTTATCGCCTCACATT
ACTTATCGAACTTCATCACTTCACCACTGCTTAAACTGACTTGGGCAGCAGAGAAAGTGTCTGCAGGCGATTTGGATGAA
ACGACCTTTAACACCGAACGAAAAGACGAGATTGGGCGTCTTGCGATCAGCTTCGAGCGCATGCAACGCTCTATTCGTGA
AAAGATTCAAACCATCAAGCAGCAAAATGAAGAGTTAGAAAGCAACATCAAGCTGATCCAAAAGCAAAACGAAGAATTAC
AGCTGGCTGATAAGCTGAAAGATGAGTTCCTTGCGACAACCTCCCATGAACTTCGCACGCCATTACACGGTATGGTTGGT
ATTGCAGAAACCTTGGTATCTGGCGCAAATGGGGCTATTCCGGCTAGCCAGAAATATCAATTGGACATCATCATCAAGAG
TGGTCAACGCCTAGCGAACCTCGTTGATGACTTATTGGATTACCACAAGATGCGCTATGGCAGCATGGATATCCAAAAGT
CAGCAGTGAGTTTAGCCAGTGCCACACGCTTAGTATTAGAGCTTTCCGGTCACCTATTGGGTAACAAGACTATCCGCATC
ATTAACCAAGTGCCTGCGGATTTGAAAGCCGTCTCAGCGGATCCTCAGCGCTTAGAACAAGTGCTGTACAATTTGATCGG
TAATGCCATCAAGTACACCTCTGAAGGTAAGATCGTCATTTCAGCAATGGTTGTTGACGATCAAGTACGAGTGCAAGTCG
TGGATACAGGTCAAGGCATCCCGGCTGAGCATCTAGAACATATCTTCGAACCTCTGATTCAAGCAGGTCAAGACGCGAGT
CGCTACCGTCAAGGTGCGGGATTGGGTCTATCAATCAGCCGTCAACTTATTGAGTTGATGGGTGGGTCATTGTATGTGAG
CAGTCAACCTATGGTCGGCACCACATTCAGCTTTACCCTGCCGCTGGCAAGTGAAGAAGAGATCCAAGCTACACAGAGCC
TTGCCGCTCGTGGGCACTTCCAAATCCCTGAGGCAAATTTTGAGAACAACGATGACTTGTCTCTGCCAGAGAACCCAAAC
GGTCCATTGCTTTACGTTGCCGATGATGAACCGGTTAACTTACGCGTTCTTGAAAGCTTCCTAAGGCTTGAAGGCTACCG
CGTACGCACTATTTCTGATGGTCCAGAAACGCTGGCGTTAATTGAACAAGAAAAGCCAGAACTGCTTTTATTGGACATCA
TGATGCCGGGGATGAGTGGTTATCAAGTGTGTAGCGAGCTTCGTGAAACTTACGATCATGCAGAGCTGCCAATCATCATG
CTGACCGCATTAAGCCAAACAGAGGACCGAGTGAGAGGCTTTGAAGCGGGCGCGAATGATTACCTGACAAAACCATTCAA
CAAACAAGAGCTAGCGGCACGCATTCAGGCGCACCTAACGGCAAGTAAAGCGGAAATGCGACACATCGAAAACAAGTTAT
TGGAGTCGGAGCTGCGCCAACGTGCAGAAGTCGAAGCAAGCTTGTTGGAGACTCAAGGTCGATTGCTAGAGCAACTAGAG
TCTGCACCAGAAGCCATTATTTGTCTTCGTGAAGACCAACGCATTCGCTTTGCTAATGAAGCGGCCTGTAAGCTGTTTAA
ACGCAGCTTAGAACAGTTGAAGCGATCTTCAGCAGACGAATTGATCGCACCTAAGTTCTTGACGGTTAAGCAGCCTCACT
ACTGTGGCAAGATTGATATCTACATTGAAGATATTCGCCAAAACATCGAAGCCGACATTCTAAAACTGCCAGAAGGCTCT
GGTTTGGATGTGATGTACATCTTTAATGTCGGCGGCGGAGCTAACGCTGCTCGTATCCACAACCTAGAGACGGCAGTTGA
AGTGCTTTCATGCTACGCATTCGATGGCGACAAAGACCAACTTCAGAAGCTAAAAGAGCTTGGTGGAGAGTTTACACGCT
TAGCAGATAAAGCTTTGGGTAACAAGAAAGACAAACAAGAGCTGCTTCGTGAGGTTCTTGTCGATACCATGACCCATGCA
TTGGAATACTGGGAGTCTGTTACCGGAGAGACCAAGTTTGCGTTTGCTGAGCAAAGTGGCTTGTGGCGTGTTTACCTAGA
CCGCAGTACCTTGCAGACTCGTACCCTCGACAAATACATGCGTATCGAGACACTACCTAAAACACCACGTTGGAGAACGG
TATTAAGCTCGATTGAGTTTATCTTGGAGCACTGTAAAGAACAGAGCCCAGAACGCGCATACATTGAAGCTCAGCGCGAC
AAAATGCAGAGACTTTTAACAAGCTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.528	100	0.766