Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   CDG68_RS20465 Genome accession   NZ_CP033133
Coordinates   3658843..3660411 (+) Length   522 a.a.
NCBI ID   WP_087552262.1    Uniprot ID   A0A3G2T899
Organism   Acinetobacter wuhouensis strain WCHAW010062     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3653843..3665411
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDG68_RS20445 (CDG68_20450) - 3654046..3655350 (+) 1305 WP_068973870.1 homoserine dehydrogenase -
  CDG68_RS20450 (CDG68_20455) thrC 3655409..3656548 (+) 1140 WP_068973871.1 threonine synthase -
  CDG68_RS20455 (CDG68_20460) pbpG 3656881..3657936 (-) 1056 WP_068973872.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  CDG68_RS20460 (CDG68_20465) - 3658170..3658805 (+) 636 WP_068973873.1 response regulator -
  CDG68_RS20465 (CDG68_20470) pilS 3658843..3660411 (+) 1569 WP_087552262.1 sensor histidine kinase Regulator
  CDG68_RS20470 (CDG68_20475) pilR 3660439..3661857 (+) 1419 WP_087552261.1 sigma-54-dependent transcriptional regulator Regulator
  CDG68_RS20475 (CDG68_20480) - 3661917..3663086 (-) 1170 WP_087552260.1 S41 family peptidase -
  CDG68_RS20480 (CDG68_20485) gpmI 3663112..3664659 (-) 1548 WP_087552259.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 522 a.a.        Molecular weight: 59687.30 Da        Isoelectric Point: 5.6067

>NTDB_id=321670 CDG68_RS20465 WP_087552262.1 3658843..3660411(+) (pilS) [Acinetobacter wuhouensis strain WCHAW010062]
MAPKVSVPIYQTIYRLGSLYSVYRVVIAFCLIVIFLISLENQQTHYLYPSLYFYSIAAFTVISALQMMLLRFFPHGISKQ
FIGFFIIDVPFLSLLVFALSGPNLSISILFVITIFSANFLLSKNQALFITLISVIAIIYQQFLGSFFDFSNLNNISNSAL
LAFLFFIVYGIGQIAIKRFQVLESLNTYQSLELFKLQNINRYILEQIEVGYVVIDDKFKIVVSNPAACQLLGISPLYAYE
QYYLSEFQSDLYEILKDAMIRDEERFQFESHQSTYTVDIRIQKLVVPHQALTLLVLEDAQRINQKVQQLKLASLGQLSAS
IAHEIRNPLAAIVQANELYLGSDPEQQTLLHQMISKQAVRINAIIKDTLDMAKNKKVDARRINLSEFIHDLLASDLNDAQ
EKIKVEIEAETRVYFDDLQLRQVLINLIRNALRHNDEHAEFILIQAYHTQSHVCIDVIDYGDGVTEQNISKLFTPFYSTE
ITGTGLGLYLSQTICEANQAKLMYIEQKQQGACFRIECPLID

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=321670 CDG68_RS20465 WP_087552262.1 3658843..3660411(+) (pilS) [Acinetobacter wuhouensis strain WCHAW010062]
ATGGCGCCTAAGGTATCTGTCCCGATTTATCAAACCATTTACCGACTAGGCTCACTGTATTCAGTCTACCGTGTGGTCAT
CGCATTCTGCCTGATTGTTATTTTTTTAATTTCACTGGAAAATCAGCAAACTCATTACCTTTATCCAAGTTTATATTTTT
ATTCGATTGCAGCATTTACTGTTATCTCAGCCTTACAAATGATGCTTCTCAGATTCTTTCCACATGGAATCAGTAAGCAA
TTCATCGGCTTTTTTATCATCGATGTTCCTTTTCTGAGTCTTCTGGTTTTTGCATTAAGCGGCCCTAATCTTTCGATTAG
TATTTTATTTGTGATTACCATCTTCTCTGCAAATTTTTTGCTCAGTAAAAATCAAGCCTTATTTATTACGCTCATCTCCG
TGATTGCAATTATTTATCAGCAGTTTCTCGGTAGTTTTTTTGATTTTTCTAATTTAAATAATATTAGTAATAGTGCTTTA
TTGGCATTTCTATTTTTTATTGTTTATGGCATCGGGCAAATCGCCATTAAACGCTTTCAGGTTTTAGAGTCGCTTAATAC
TTACCAATCCTTAGAATTATTTAAATTACAAAACATTAACCGCTATATTTTAGAACAAATCGAAGTAGGCTATGTTGTGA
TCGATGATAAATTCAAAATCGTCGTGAGCAATCCAGCAGCTTGTCAACTTTTGGGTATTTCACCACTTTATGCCTACGAA
CAATATTATTTATCGGAGTTTCAATCTGATTTATATGAAATCTTAAAAGACGCAATGATTCGTGATGAAGAACGTTTCCA
GTTTGAATCACATCAATCTACCTATACAGTCGATATTCGTATTCAAAAACTGGTTGTTCCTCATCAAGCCCTCACGCTTT
TAGTCCTCGAAGATGCTCAACGCATCAATCAAAAAGTACAACAACTCAAACTTGCCTCACTCGGGCAACTTTCTGCCAGT
ATTGCACATGAAATTCGTAATCCCTTGGCGGCAATCGTCCAAGCCAATGAGCTCTATTTAGGTAGTGATCCTGAGCAACA
AACACTGCTTCATCAGATGATTAGCAAACAAGCGGTACGTATCAATGCCATCATTAAAGATACATTGGATATGGCAAAAA
ATAAAAAGGTCGATGCCAGAAGAATAAATCTATCTGAATTTATCCATGACTTATTAGCAAGCGACTTAAATGATGCTCAA
GAGAAAATTAAAGTCGAAATCGAAGCTGAAACTCGTGTTTACTTTGACGATCTGCAACTACGGCAAGTTTTGATTAATTT
GATTCGAAATGCGTTACGTCATAATGATGAGCATGCTGAATTCATTTTAATACAGGCATACCATACTCAATCTCACGTCT
GTATCGATGTGATTGATTATGGGGATGGCGTCACAGAACAAAATATTTCTAAATTATTTACACCATTTTATAGTACCGAA
ATTACTGGAACTGGTTTAGGATTATACCTATCGCAAACGATCTGCGAAGCAAATCAAGCGAAATTAATGTATATAGAGCA
AAAACAACAAGGGGCATGTTTCCGGATTGAATGCCCGCTCATAGATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-520)

PAS fold (PAS)

(203-282)

His Kinase A (phospho-acceptor) domain (HisKA)

(313-374)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3G2T899

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

54.688

98.084

0.536

Multiple sequence alignment