Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   CDG68_RS19915 Genome accession   NZ_CP033133
Coordinates   3549648..3551873 (+) Length   741 a.a.
NCBI ID   WP_087553136.1    Uniprot ID   A0A3G2T6R4
Organism   Acinetobacter wuhouensis strain WCHAW010062     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3544648..3556873
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDG68_RS19890 (CDG68_19895) lnt 3545057..3546616 (+) 1560 WP_087553133.1 apolipoprotein N-acyltransferase -
  CDG68_RS19895 (CDG68_19900) - 3546697..3547122 (+) 426 WP_087553134.1 GFA family protein -
  CDG68_RS19900 (CDG68_19905) - 3547179..3547514 (-) 336 WP_068975106.1 hypothetical protein -
  CDG68_RS19905 (CDG68_19910) gspG 3547797..3548234 (-) 438 WP_068975105.1 type II secretion system major pseudopilin GspG -
  CDG68_RS19910 (CDG68_19915) gspF 3548288..3549493 (-) 1206 WP_087553135.1 type II secretion system inner membrane protein GspF -
  CDG68_RS19915 (CDG68_19920) priA 3549648..3551873 (+) 2226 WP_087553136.1 primosomal protein N' Machinery gene
  CDG68_RS19920 (CDG68_19925) - 3551891..3554404 (-) 2514 WP_087553137.1 tetratricopeptide repeat protein -
  CDG68_RS19925 (CDG68_19930) - 3554483..3554755 (-) 273 WP_087553138.1 hypothetical protein -
  CDG68_RS19930 (CDG68_19935) - 3554787..3555254 (-) 468 WP_087553139.1 Holliday junction resolvase-like protein -
  CDG68_RS19935 (CDG68_19940) - 3555398..3556042 (+) 645 WP_068975099.1 ParA family protein -

Sequence

Protein


Download         Length: 741 a.a.        Molecular weight: 84379.49 Da        Isoelectric Point: 8.3551

>NTDB_id=321665 CDG68_RS19915 WP_087553136.1 3549648..3551873(+) (priA) [Acinetobacter wuhouensis strain WCHAW010062]
MPNNIDTPTPIYRVQVAVPVYLNDCFDYQVSPEQYAQAEIGARVAVSFGRQNLIGIIVKKIPIDEPLDSHFKLKFITELL
DEQAILDAKVLSLLTWSAQYYQFPIGEVIQTALPTLLRQGKPYNLLARIWKVLDLNAEDKVKRSEKQQEAYKILKLHPKG
TQENILNLSGVETATLKALETKDIVRCDLEEQNFKPEPVQLAQMPLTPNEDQKKAIQNILKSQNKYHAYLLDGLTGSGKT
EVYLQVMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCNIALLHSGLNDTKRLQAWQHAQTGKASIILGTRSAIYTPL
PNLGLIILDEEHDLSFKQQEGFRYHARDVAMYRAHLENCPIILGSATPSIDSYYLERQDKLTRIELNQRAGTAVMPKMHL
IDLKIAKKQNGLSDTLIAEVKKRLEKKEQVLIFLNRRGYAPVLICESCGWQANCPHCDAHFTLHLKPYQHLHCHHCGTIN
RMPDACPSCNQTQLKPIGMGTAKVEETLNELFPNFPVLRVDRDSTSRVGSWQKIYDQIQKSEPTILLGTQMLAKGHHFPY
VTLVAILDIDAGLLSVDFRATERTAQLIVQVAGRAGRGEKKGEVYLQTLRPDHPLLNTLIDEDYRAFAKQTLKDRQAALM
PPCRYAIMIRCESKHQEENLKFLTEMTQLLRQNSEENLIDIWGPIPAPMERKAGRYQSHVVLLSQDRAKMHFYVRQWWAN
LLHSKPSSMKVTIDVDPQELS

Nucleotide


Download         Length: 2226 bp        

>NTDB_id=321665 CDG68_RS19915 WP_087553136.1 3549648..3551873(+) (priA) [Acinetobacter wuhouensis strain WCHAW010062]
ATGCCGAATAATATTGATACGCCGACACCGATTTACCGAGTTCAAGTTGCTGTACCTGTCTATTTGAACGACTGCTTTGA
TTATCAAGTCAGTCCTGAACAATATGCACAGGCGGAGATTGGTGCTCGTGTGGCGGTATCTTTTGGTCGACAAAATCTGA
TCGGCATCATTGTAAAAAAAATTCCCATTGATGAGCCACTCGATTCACATTTCAAACTTAAATTCATCACTGAATTGTTA
GATGAACAAGCCATTTTAGATGCGAAAGTTTTAAGTTTATTGACATGGTCTGCGCAATATTATCAATTTCCAATCGGAGA
GGTGATTCAAACCGCTTTACCGACCTTATTACGCCAAGGGAAGCCCTATAATTTATTGGCACGTATTTGGAAAGTACTCG
ATTTAAATGCTGAAGACAAAGTAAAACGTTCTGAAAAGCAACAAGAAGCTTATAAAATTTTAAAATTACATCCCAAAGGG
ACACAGGAAAATATCCTCAATCTCAGTGGTGTAGAAACAGCGACTTTAAAAGCACTTGAAACGAAAGACATTGTCCGTTG
TGATTTAGAAGAACAAAACTTTAAGCCTGAACCTGTGCAATTGGCGCAAATGCCACTGACACCGAATGAAGATCAAAAGA
AAGCTATTCAAAATATTTTAAAATCGCAAAATAAATATCATGCATATTTACTCGATGGTTTAACAGGCAGTGGTAAAACT
GAAGTCTATTTGCAAGTCATGCATGAGGTGCTGAAACAAGGCAAGCAAGTTTTGGTTTTAGTGCCTGAAATTGGTTTAAC
CCCACAAACTATTAGCCGTTTCCAATCCCGCTTTCATTGCAATATTGCTCTGCTCCATTCAGGTTTAAATGACACTAAAC
GTCTACAAGCTTGGCAACATGCACAGACGGGTAAAGCGTCTATTATTTTGGGTACACGTTCAGCAATTTATACGCCATTG
CCAAATCTGGGTTTGATCATTTTAGATGAGGAACATGATCTCTCATTTAAACAGCAAGAAGGCTTCCGTTATCATGCACG
TGATGTGGCGATGTATCGTGCACACTTGGAAAATTGTCCGATTATTTTAGGTTCTGCAACACCAAGTATCGACAGTTATT
ATTTGGAACGTCAAGACAAACTGACACGTATTGAATTGAATCAACGTGCAGGCACGGCGGTGATGCCAAAAATGCATCTG
ATTGATTTAAAAATTGCGAAAAAACAAAATGGCTTAAGCGATACTTTAATTGCCGAAGTAAAAAAGCGTTTAGAGAAAAA
AGAACAGGTTTTAATTTTTCTCAACCGTCGTGGTTATGCCCCTGTTTTAATTTGTGAAAGTTGTGGATGGCAAGCCAATT
GTCCACATTGCGATGCGCATTTCACCTTACATTTAAAACCGTATCAGCATTTGCATTGTCATCATTGTGGCACGATTAAT
CGCATGCCTGATGCTTGCCCGAGTTGTAATCAAACACAGCTCAAACCAATTGGTATGGGCACTGCAAAAGTTGAAGAAAC
CTTAAATGAGCTATTTCCAAATTTTCCAGTGTTACGTGTAGACCGTGATTCCACCAGTCGTGTCGGCAGTTGGCAAAAAA
TTTATGATCAAATTCAAAAGAGTGAACCGACGATTTTACTGGGTACACAAATGCTGGCGAAGGGTCATCATTTCCCTTAT
GTCACTTTAGTGGCGATTTTAGATATTGATGCGGGCTTACTCAGTGTCGATTTCAGAGCGACTGAACGAACGGCCCAGCT
GATTGTTCAGGTCGCTGGTCGTGCTGGTCGCGGCGAGAAAAAAGGCGAAGTGTATTTACAGACTTTACGTCCCGATCATC
CCTTATTAAATACACTCATTGATGAAGATTATCGGGCTTTTGCCAAACAGACATTGAAAGATCGTCAAGCTGCCTTAATG
CCACCTTGTCGTTATGCCATCATGATCCGCTGTGAATCTAAACATCAGGAAGAAAATTTAAAATTCCTCACTGAAATGAC
GCAATTACTTCGTCAAAATTCAGAGGAAAATTTAATTGATATTTGGGGACCCATTCCTGCGCCAATGGAACGCAAAGCGG
GACGCTATCAGTCGCATGTTGTTTTGCTTTCACAAGATCGCGCCAAGATGCATTTCTATGTACGTCAATGGTGGGCTAAT
CTTTTACACAGCAAGCCATCTTCGATGAAAGTGACGATTGATGTTGATCCACAGGAGTTGAGTTAA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(642-737)

Type III restriction enzyme, res subunit (ResIII)

(207-369)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3G2T6R4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

72.432

99.865

0.723

Multiple sequence alignment