Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   CDG68_RS19185 Genome accession   NZ_CP033133
Coordinates   3418678..3419559 (-) Length   293 a.a.
NCBI ID   WP_087553821.1    Uniprot ID   A0A3G2T5Q3
Organism   Acinetobacter wuhouensis strain WCHAW010062     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3413678..3424559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDG68_RS19160 (CDG68_19165) - 3414356..3414730 (-) 375 WP_087553817.1 cytochrome b562 -
  CDG68_RS19165 (CDG68_19170) coaBC 3414862..3416127 (-) 1266 WP_087553818.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC -
  CDG68_RS19170 (CDG68_19175) radC 3416242..3416988 (+) 747 WP_087553819.1 RadC family protein -
  CDG68_RS19175 (CDG68_19180) - 3417028..3417939 (+) 912 WP_068973624.1 bestrophin family protein -
  CDG68_RS19180 (CDG68_19185) - 3417976..3418263 (+) 288 WP_087553820.1 antibiotic biosynthesis monooxygenase family protein -
  CDG68_RS19185 (CDG68_19190) tonB2 3418678..3419559 (-) 882 WP_087553821.1 energy transducer TonB Machinery gene
  CDG68_RS19190 (CDG68_19195) - 3419789..3420478 (+) 690 WP_087553822.1 hypothetical protein -
  CDG68_RS19195 (CDG68_19200) - 3420913..3421620 (+) 708 WP_087553823.1 DUF3108 domain-containing protein -
  CDG68_RS19200 (CDG68_19205) - 3421724..3422299 (+) 576 WP_068973620.1 xanthine phosphoribosyltransferase -
  CDG68_RS19205 (CDG68_19210) - 3422449..3423309 (+) 861 WP_087553824.1 acyl-CoA thioesterase -
  CDG68_RS19210 (CDG68_19215) - 3423550..3423912 (+) 363 WP_068973618.1 hypothetical protein -

Sequence

Protein


Download         Length: 293 a.a.        Molecular weight: 33530.06 Da        Isoelectric Point: 7.3986

>NTDB_id=321662 CDG68_RS19185 WP_087553821.1 3418678..3419559(-) (tonB2) [Acinetobacter wuhouensis strain WCHAW010062]
MIKKLYADTKHSDYWWQDPLFIGAVSVAVITHLLFLSIQFGMPQQNDAATKEIAISIRPSEDKVKDADFLAQADQQGSGT
FRKEHRMSSDMPAQAEDQSAGDQQLQALEQMQQKRELNFEEKVLMTVLSWQKQAEQNDRKKAMEELQSQMQAKAAMVASL
EAQYLQKQQNFSKQQKIKTLDGIQAKQDASAGYLDKFREKVEMYGNRYYPDLAKQQRLSGEVRLMVILNNEGGIRAIRLI
DSSGHSILDEAAKNSVRKGAPFGRFDSKMKDISELRIIRTWRFDPAEAEFEVR

Nucleotide


Download         Length: 882 bp        

>NTDB_id=321662 CDG68_RS19185 WP_087553821.1 3418678..3419559(-) (tonB2) [Acinetobacter wuhouensis strain WCHAW010062]
ATGATAAAAAAATTATATGCAGATACCAAGCATTCAGACTATTGGTGGCAAGATCCGTTATTTATCGGTGCTGTCTCAGT
TGCAGTCATTACGCATCTGCTTTTTTTATCGATCCAATTTGGCATGCCTCAACAAAATGATGCTGCGACCAAAGAAATCG
CGATCTCAATTCGACCAAGTGAAGACAAAGTCAAAGATGCGGACTTTCTCGCTCAAGCTGATCAGCAGGGTTCAGGGACA
TTCCGTAAAGAACATCGTATGTCGAGCGATATGCCTGCTCAAGCAGAAGATCAAAGTGCTGGGGATCAGCAGTTGCAAGC
TTTGGAACAAATGCAACAAAAGCGTGAATTAAACTTTGAAGAAAAAGTATTGATGACGGTTTTAAGTTGGCAGAAACAAG
CCGAGCAGAATGATCGTAAAAAAGCCATGGAAGAGTTGCAAAGCCAAATGCAAGCCAAGGCTGCAATGGTGGCAAGCTTA
GAGGCGCAATATTTACAGAAACAGCAAAACTTTAGTAAGCAACAAAAAATTAAAACCCTCGATGGTATACAAGCCAAGCA
AGATGCTTCCGCGGGTTATTTAGATAAGTTTCGTGAAAAAGTCGAAATGTACGGCAACCGTTATTATCCTGATCTTGCGA
AGCAACAACGCCTTTCAGGTGAGGTTCGTTTGATGGTGATTTTAAACAATGAAGGTGGGATTCGTGCCATTCGTTTGATT
GATAGCTCAGGGCATTCAATCTTGGATGAAGCAGCCAAGAACTCAGTCCGTAAGGGTGCGCCGTTTGGGCGCTTTGATTC
CAAAATGAAGGACATTTCAGAGCTACGTATTATTCGAACTTGGCGTTTTGATCCTGCGGAAGCTGAGTTTGAAGTGCGTT
AA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(206-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3G2T5Q3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

72.355

100

0.724

Multiple sequence alignment