Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   D8768_RS16240 Genome accession   NZ_CP033102
Coordinates   3307373..3307999 (-) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain L51     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 3302373..3312999
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D8768_RS16225 (D8768_16485) helD 3302612..3304666 (-) 2055 WP_157508071.1 DNA helicase IV -
  D8768_RS16230 (D8768_16490) - 3304789..3305235 (+) 447 WP_022647660.1 YccF domain-containing protein -
  D8768_RS16235 (D8768_16495) yccS 3305254..3307416 (+) 2163 WP_022647659.1 YccS family putative transporter -
  D8768_RS16240 (D8768_16500) sxy/tfoX 3307373..3307999 (-) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  D8768_RS16245 (D8768_16505) sulA 3308217..3308726 (+) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  D8768_RS16250 (D8768_16510) ompA 3309083..3310135 (+) 1053 WP_017694761.1 porin OmpA -
  D8768_RS16255 (D8768_16515) matP 3310201..3310653 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  D8768_RS16260 (D8768_16520) - 3310840..3312600 (+) 1761 WP_023305819.1 AAA family ATPase -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=321363 D8768_RS16240 WP_023315767.1 3307373..3307999(-) (sxy/tfoX) [Enterobacter hormaechei strain L51]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=321363 D8768_RS16240 WP_023315767.1 3307373..3307999(-) (sxy/tfoX) [Enterobacter hormaechei strain L51]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGTGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTATTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572


Multiple sequence alignment