Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   EAH52_RS01185 Genome accession   NZ_CP033098
Coordinates   265578..266243 (+) Length   221 a.a.
NCBI ID   WP_046464456.1    Uniprot ID   A0A8B2ZDZ6
Organism   Staphylococcus warneri strain SWO     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 260578..271243
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EAH52_RS01165 - 261173..261622 (+) 450 WP_002467363.1 MarR family winged helix-turn-helix transcriptional regulator -
  EAH52_RS01170 - 261857..263323 (+) 1467 WP_002467351.1 poly-gamma-glutamate hydrolase family protein -
  EAH52_RS01175 - 263504..263605 (+) 102 WP_015364644.1 SE2200 family small protein -
  EAH52_RS01180 - 263688..265141 (-) 1454 Protein_230 alkaline phosphatase -
  EAH52_RS12790 - 265398..265556 (+) 159 WP_002467360.1 hypothetical protein -
  EAH52_RS01185 braR 265578..266243 (+) 666 WP_046464456.1 response regulator transcription factor Regulator
  EAH52_RS01190 braS 266249..267145 (+) 897 WP_002467359.1 HAMP domain-containing sensor histidine kinase Regulator
  EAH52_RS01195 - 267249..267995 (+) 747 WP_002467357.1 ABC transporter ATP-binding protein -
  EAH52_RS01200 - 268013..270007 (+) 1995 WP_254051621.1 FtsX-like permease family protein -
  EAH52_RS01205 - 270130..271161 (+) 1032 WP_015364646.1 DUF4064 domain-containing protein -

Sequence


Protein


Download         Length: 221 a.a.        Molecular weight: 25526.69 Da        Isoelectric Point: 5.1524

>NTDB_id=321318 EAH52_RS01185 WP_046464456.1 265578..266243(+) (braR) [Staphylococcus warneri strain SWO]
MKILIVEDDLVIAESLANELKKWNYDVKMAKKFSHVLDDFKDYLPDLVLLDINLPTLNGFHWCQEMRKISNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKVQALLRRTYDLAVSNNELNVKGCKLIVDEAKLMFQDDVTQLSLTELQIVK
LLFQNEGKFVNRTALIEKCWESENYIDDNTLAVNMTRLRKKLSQIGLTDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=321318 EAH52_RS01185 WP_046464456.1 265578..266243(+) (braR) [Staphylococcus warneri strain SWO]
ATGAAGATTTTGATAGTAGAAGATGACTTAGTCATTGCAGAAAGTTTAGCGAATGAACTTAAGAAATGGAACTATGACGT
TAAGATGGCAAAAAAGTTTTCACATGTTTTAGATGATTTCAAAGACTATCTACCTGACTTAGTACTACTAGATATTAATT
TACCAACTTTAAATGGCTTCCATTGGTGCCAAGAAATGAGAAAAATCTCAAACGTACCTATTATATTTATTAGTTCAAGG
ACAGATAATATGGATCAAATAATGGCGATACAAATGGGTGGCGATGATTTTATTGAGAAACCATTTAATTTATCGTTAAC
AGTTGCTAAAGTACAAGCTTTATTACGACGAACTTATGATTTAGCTGTATCTAATAACGAATTAAATGTTAAAGGGTGTA
AACTGATTGTTGATGAGGCTAAGTTAATGTTTCAAGATGATGTGACACAACTGTCTTTAACAGAACTTCAAATCGTTAAA
CTGTTGTTTCAAAATGAAGGTAAATTTGTAAATCGAACAGCTTTAATTGAAAAATGTTGGGAATCAGAGAATTATATTGA
TGATAATACTTTGGCTGTAAATATGACACGATTGCGAAAAAAATTAAGTCAAATTGGCTTAACAGATTTTATTGAAACGA
AGAAAAATGTGGGATATAGGGTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A8B2ZDZ6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.281

100

0.783


Multiple sequence alignment