Detailed information NTG0321163

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EAG08_RS10375
• Genome accession: NZ_CP033070
• Coordinates: 2304790..2305899 (+)
• Length: 369 a.a.
• NCBI ID: WP_129535366.1
• Uniprot ID: A0A3G2G809
• Organism: Chryseobacterium sp. 3008163
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2299790..2310899

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EAG08_RS10355 (EAG08_10460)	sufD	2300349..2301655 (+)	1307	Protein_2109	Fe-S cluster assembly protein SufD	-
EAG08_RS10360 (EAG08_10465)	-	2301730..2302527 (-)	798	WP_410493259.1	DUF3078 domain-containing protein	-
EAG08_RS10365 (EAG08_10470)	-	2302836..2303768 (-)	933	WP_129535364.1	DUF3078 domain-containing protein	-
EAG08_RS10370 (EAG08_10475)	-	2303985..2304752 (+)	768	WP_129535365.1	rhomboid family intramembrane serine protease	-
EAG08_RS10375 (EAG08_10480)	dprA	2304790..2305899 (+)	1110	WP_129535366.1	DNA-processing protein DprA	Machinery gene
EAG08_RS10380 (EAG08_10485)	gdhA	2306090..2307448 (+)	1359	WP_129535367.1	NADP-specific glutamate dehydrogenase	-
EAG08_RS10385 (EAG08_10490)	-	2307621..2308517 (-)	897	WP_129535368.1	hypothetical protein	-
EAG08_RS10390 (EAG08_10495)	-	2308544..2309140 (-)	597	WP_129535369.1	hypothetical protein	-
EAG08_RS22040	-	2309244..2309597 (-)	354	WP_228446493.1	LytTR family DNA-binding domain-containing protein	-
EAG08_RS10400 (EAG08_10505)	-	2310218..2310706 (-)	489	WP_129535371.1	YkgJ family cysteine cluster protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41358.14 Da
• Isoelectric Point: 7.0599

>NTDB_id=321163 EAG08_RS10375 WP_129535366.1 2304790..2305899(+) (dprA) [Chryseobacterium sp. 3008163]
MYSEEHLYSIALRECNFIGDINFFKLVRSFGSAKNVWQSAKKELSKTDGIGTKTVSDIGNPEHLKFAEKELLFCEKNSIK
INLRHQNELPFLLKECDDAPAILYQKGNFDNNLKTISLVGTRNITAYGKKFIEDFFEEAKSHQFISVSGLALGVDKEVHE
QSLKHQIPTIGVLAHGFHTFYPSKNRKLSEKIIEENGGLLTEFNSSRKPDRENFIQRNRIVAGISSSTIVVETAFGGGSI
STATFANTYNRDVFALPGKITDKYSQGCNHLIFQNKATAISTIKDLLDLVGFNDPKEKIEELFPRSEISIQLSENQELIY
QNIAANPHVSLDDLAEKISVASHKILPVILELELLGKVKSFSGRQFLAI

Nucleotide

• Length: 1110 bp

>NTDB_id=321163 EAG08_RS10375 WP_129535366.1 2304790..2305899(+) (dprA) [Chryseobacterium sp. 3008163]
ATGTATTCTGAAGAACATCTCTACTCTATTGCTCTCCGCGAGTGTAATTTTATAGGTGATATTAATTTTTTCAAACTTGT
CCGAAGTTTCGGAAGCGCAAAAAATGTTTGGCAGTCAGCAAAAAAAGAACTCAGCAAAACCGACGGAATCGGCACAAAAA
CAGTTTCCGATATTGGAAATCCTGAGCATTTGAAATTTGCTGAAAAAGAGCTTTTATTTTGCGAAAAAAATTCCATAAAA
ATCAATCTACGGCATCAAAATGAACTTCCTTTTTTGCTCAAAGAATGTGATGATGCGCCCGCAATTCTCTACCAGAAAGG
AAATTTTGACAACAATTTAAAAACGATAAGTTTAGTTGGAACCAGAAATATTACAGCTTACGGCAAAAAGTTTATCGAAG
ATTTTTTCGAAGAAGCAAAATCACATCAATTCATCTCCGTTAGCGGTTTAGCTTTAGGTGTTGATAAGGAAGTTCACGAG
CAATCATTGAAACATCAGATTCCCACGATTGGAGTTTTGGCGCATGGTTTTCACACGTTTTACCCTTCAAAAAACAGAAA
ACTTTCAGAAAAAATCATTGAAGAAAACGGAGGATTGCTTACAGAATTTAATTCTTCAAGAAAGCCGGATCGGGAAAATT
TTATTCAAAGAAACAGAATTGTTGCCGGAATTTCTTCATCTACGATTGTGGTAGAAACAGCATTCGGCGGAGGCTCAATC
AGTACCGCAACATTTGCCAACACCTATAACAGGGACGTTTTTGCTTTACCCGGAAAGATTACTGACAAATACAGCCAAGG
TTGCAACCATCTTATTTTTCAGAATAAAGCGACAGCCATTTCTACAATTAAAGATTTACTTGATTTGGTTGGTTTTAATG
ATCCAAAAGAGAAAATTGAAGAACTTTTTCCACGCAGTGAAATTTCAATTCAATTATCTGAAAATCAAGAATTAATATAT
CAAAATATTGCAGCAAATCCACACGTCTCTTTGGATGATTTAGCAGAAAAAATTTCGGTGGCTTCACACAAAATACTGCC
GGTAATATTAGAATTGGAGCTTTTGGGAAAAGTAAAATCATTTTCCGGGAGACAATTTTTAGCAATATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

3D structure

• AlphaFold DB: A0A3G2G809

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	55.22	98.645	0.545