Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EAG14_RS17070 Genome accession   NZ_CP033069
Coordinates   3843990..3844388 (-) Length   132 a.a.
NCBI ID   WP_044398823.1    Uniprot ID   -
Organism   Acidovorax sp. 1608163     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3838990..3849388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EAG14_RS17055 (EAG14_17055) - 3840772..3843060 (-) 2289 WP_121729595.1 methyl-accepting chemotaxis protein -
  EAG14_RS17060 (EAG14_17060) - 3843082..3843609 (-) 528 WP_099658086.1 chemotaxis protein CheW -
  EAG14_RS17065 (EAG14_17065) - 3843625..3843990 (-) 366 WP_044398821.1 PleD family two-component system response regulator -
  EAG14_RS17070 (EAG14_17070) pilG 3843990..3844388 (-) 399 WP_044398823.1 PleD family two-component system response regulator Regulator
  EAG14_RS17075 (EAG14_17075) - 3844439..3844612 (-) 174 WP_099658085.1 rubredoxin -
  EAG14_RS17080 (EAG14_17080) - 3844707..3845660 (+) 954 WP_121729596.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  EAG14_RS17085 (EAG14_17085) hemL 3845644..3846948 (+) 1305 WP_099658083.1 glutamate-1-semialdehyde 2,1-aminomutase -
  EAG14_RS17090 (EAG14_17090) - 3847095..3848840 (+) 1746 WP_121729597.1 alkaline phosphatase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14597.82 Da        Isoelectric Point: 6.9234

>NTDB_id=321148 EAG14_RS17070 WP_044398823.1 3843990..3844388(-) (pilG) [Acidovorax sp. 1608163]
MTTTGASFKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
DTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNSQLGAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=321148 EAG14_RS17070 WP_044398823.1 3843990..3844388(-) (pilG) [Acidovorax sp. 1608163]
TTGACTACAACAGGCGCATCTTTCAAGGTGCTCGTGGTGGATGACAGCAACACCATCCGTCGAAGCGCCGAGATTTTTCT
CAAGCAGGGGGGGCACGAAGTCTTGTTGGCTGACGACGGCTTCGATGCCTTGGCCAAGGTGAACGACTATCAGCCTCAGC
TGATTTTCTGTGACATCCTCATGCCGAAGTTAGACGGGTATCAAACCTGCGCGATCATCAAGCGCAACGCCCGTTTTGCA
GATACCCCGGTGGTGATGCTTTCTTCCAAAGACGGTGTGTTCGACAAGGCCCGTGGCCGCATGGTCGGCTGCCAGGAATA
CCTCACCAAACCCTTTACCAAAGACCAGTTGCTGCAGGCTGTGCAGCAATTTGGCAATTCCCAACTAGGAGCGATGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.198

91.667

0.515

Multiple sequence alignment