Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   D9C22_RS07555 Genome accession   NZ_CP033064
Coordinates   1438843..1439307 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus sp. WR11     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1433843..1444307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C22_RS07535 (D9C22_07540) kinA 1434310..1436130 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  D9C22_RS07540 (D9C22_07545) - 1436140..1437321 (-) 1182 WP_041850887.1 aminotransferase A -
  D9C22_RS07545 (D9C22_07550) - 1437523..1437684 (-) 162 WP_014476654.1 hypothetical protein -
  D9C22_RS07550 (D9C22_07555) cheV 1437888..1438799 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  D9C22_RS07555 (D9C22_07560) kre 1438843..1439307 (-) 465 WP_003232406.1 YkyB family protein Regulator
  D9C22_RS07560 (D9C22_07565) - 1439433..1440725 (-) 1293 WP_014479656.1 MFS transporter -
  D9C22_RS07565 (D9C22_07570) - 1440801..1441295 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  D9C22_RS07570 (D9C22_07575) - 1441352..1442212 (-) 861 WP_041850886.1 metallophosphoesterase -
  D9C22_RS07575 (D9C22_07580) fadH 1442355..1443119 (+) 765 WP_041850885.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=321058 D9C22_RS07555 WP_003232406.1 1438843..1439307(-) (kre) [Bacillus sp. WR11]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=321058 D9C22_RS07555 WP_003232406.1 1438843..1439307(-) (kre) [Bacillus sp. WR11]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment