Detailed information NTG0032100

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: BCB4264_RS26180
• Genome accession: NC_011725
• Coordinates: 5107817..5109166 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225358.1
• Uniprot ID: -
• Organism: Bacillus cereus B4264
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5102817..5114166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCB4264_RS26160 (BCB4264_A5307)	secA	5103142..5105649 (-)	2508	WP_000579385.1	preprotein translocase subunit SecA	-
BCB4264_RS26165 (BCB4264_A5308)	raiA	5105924..5106466 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
BCB4264_RS26170 (BCB4264_A5310)	cspC	5106789..5106986 (-)	198	WP_001990088.1	cold shock protein CspC	-
BCB4264_RS26175 (BCB4264_A5311)	-	5107113..5107817 (-)	705	WP_033666421.1	ComF family protein	-
BCB4264_RS26180 (BCB4264_A5312)	comFA	5107817..5109166 (-)	1350	WP_000225358.1	ATP-dependent helicase ComFA	Machinery gene
BCB4264_RS26185 (BCB4264_A5314)	-	5109294..5110715 (-)	1422	WP_000499492.1	C40 family peptidase	-
BCB4264_RS26190 (BCB4264_A5315)	-	5110864..5111178 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
BCB4264_RS26195 (BCB4264_A5316)	-	5111351..5112193 (-)	843	WP_000684725.1	DegV family protein	-
BCB4264_RS26200 (BCB4264_A5318)	-	5112430..5113065 (+)	636	WP_000926669.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51135.01 Da
• Isoelectric Point: 10.0105

>NTDB_id=32100 BCB4264_RS26180 WP_000225358.1 5107817..5109166(-) (comFA) [Bacillus cereus B4264]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIAERKREKNSNLLQWDGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLRWLKMHLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEALYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=32100 BCB4264_RS26180 WP_000225358.1 5107817..5109166(-) (comFA) [Bacillus cereus B4264]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGGACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTATTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACGATGGTTAAAGATGCACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACTGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (108-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	53.349	93.096	0.497