Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | EST53_RS19840 | Genome accession | NZ_CP040269 |
| Coordinates | 4108697..4109212 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130210.1 | Uniprot ID | B6I678 |
| Organism | Escherichia coli strain 1500 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4103697..4114212
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EST53_RS19795 (EST53_19795) | csrA | 4104284..4104469 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| EST53_RS19825 (EST53_19825) | yqaB | 4105927..4106493 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| EST53_RS19830 (EST53_19830) | yqaA | 4106490..4106918 (+) | 429 | WP_001287454.1 | YqaA family protein | - |
| EST53_RS19835 (EST53_19835) | gshA | 4106991..4108547 (+) | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| EST53_RS19840 (EST53_19840) | luxS | 4108697..4109212 (+) | 516 | WP_001130210.1 | S-ribosylhomocysteine lyase | Regulator |
| EST53_RS19845 (EST53_19845) | emrB | 4109276..4110814 (-) | 1539 | WP_089679097.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| EST53_RS19850 (EST53_19850) | emrA | 4110831..4112003 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| EST53_RS19855 (EST53_19855) | emrR | 4112130..4112660 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| EST53_RS19860 (EST53_19860) | ygaH | 4112751..4113086 (-) | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| EST53_RS19865 (EST53_19865) | ygaZ | 4113076..4113813 (-) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19417.13 Da Isoelectric Point: 4.7556
>NTDB_id=320953 EST53_RS19840 WP_001130210.1 4108697..4109212(+) (luxS) [Escherichia coli strain 1500]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPEEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPEEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=320953 EST53_RS19840 WP_001130210.1 4108697..4109212(+) (luxS) [Escherichia coli strain 1500]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCG
CTGCCGGAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCG
CTGCCGGAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |