Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   D9777_RS08735 Genome accession   NZ_CP033054
Coordinates   1663320..1663784 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain Bac57     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1658320..1668784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9777_RS08715 - 1658801..1660621 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  D9777_RS08720 - 1660646..1661815 (-) 1170 WP_007611083.1 aminotransferase A -
  D9777_RS21440 - 1662016..1662177 (-) 162 WP_007409608.1 hypothetical protein -
  D9777_RS08730 cheV 1662366..1663277 (+) 912 WP_014417604.1 chemotaxis protein CheV -
  D9777_RS08735 kre 1663320..1663784 (-) 465 WP_003154622.1 YkyB family protein Regulator
  D9777_RS08740 - 1663907..1665199 (-) 1293 WP_014417606.1 MFS transporter -
  D9777_RS08745 - 1665275..1665769 (-) 495 WP_089072484.1 L,D-transpeptidase family protein -
  D9777_RS08750 - 1665844..1666707 (-) 864 WP_021493757.1 metallophosphoesterase -
  D9777_RS08755 fadH 1666851..1667615 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  D9777_RS08760 - 1667729..1668277 (+) 549 WP_021493756.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=320929 D9777_RS08735 WP_003154622.1 1663320..1663784(-) (kre) [Bacillus velezensis strain Bac57]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=320929 D9777_RS08735 WP_003154622.1 1663320..1663784(-) (kre) [Bacillus velezensis strain Bac57]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCTGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment