Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   D9777_RS03250 Genome accession   NZ_CP033054
Coordinates   639523..639642 (+) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis strain Bac57     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 634523..644642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9777_RS03235 - 636135..636818 (+) 684 WP_014416901.1 response regulator transcription factor -
  D9777_RS03240 - 636805..638232 (+) 1428 WP_089072406.1 HAMP domain-containing sensor histidine kinase -
  D9777_RS03245 rapC 638391..639539 (+) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  D9777_RS03250 phrC 639523..639642 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  D9777_RS03255 - 639794..639889 (-) 96 WP_021495118.1 YjcZ family sporulation protein -
  D9777_RS03260 - 639984..641348 (-) 1365 WP_021495117.1 aspartate kinase -
  D9777_RS03265 ceuB 641762..642715 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  D9777_RS03270 - 642705..643652 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  D9777_RS03275 - 643646..644404 (+) 759 WP_012116804.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=320910 D9777_RS03250 WP_003156334.1 639523..639642(+) (phrC) [Bacillus velezensis strain Bac57]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=320910 D9777_RS03250 WP_003156334.1 639523..639642(+) (phrC) [Bacillus velezensis strain Bac57]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718

Multiple sequence alignment