Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   D9779_RS08620 Genome accession   NZ_CP033052
Coordinates   1670680..1671273 (+) Length   197 a.a.
NCBI ID   WP_010328488.1    Uniprot ID   A0AAP3FUR0
Organism   Bacillus vallismortis strain Bac111     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1665680..1676273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9779_RS08590 dapD 1665869..1666579 (+) 711 WP_010328497.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  D9779_RS08595 - 1666650..1667774 (+) 1125 WP_039073790.1 N-acetyldiaminopimelate deacetylase -
  D9779_RS08600 - 1667836..1668081 (+) 246 WP_039073791.1 YkuS family protein -
  D9779_RS08605 - 1668119..1668922 (-) 804 WP_121642484.1 mechanosensitive ion channel family protein -
  D9779_RS08610 ahpA 1669165..1669707 (+) 543 WP_010328491.1 biofilm-specific peroxidase AhpA -
  D9779_RS08615 - 1669775..1670227 (+) 453 WP_010328490.1 TlpA disulfide reductase family protein -
  D9779_RS08620 rok 1670680..1671273 (+) 594 WP_010328488.1 transcriptional regulator Rok Regulator
  D9779_RS08625 - 1671314..1672279 (-) 966 WP_121642485.1 sporulation protein -
  D9779_RS08630 - 1672415..1673014 (+) 600 WP_121642486.1 molybdenum cofactor guanylyltransferase -
  D9779_RS08635 - 1673065..1674084 (+) 1020 WP_121642487.1 molybdopterin-synthase adenylyltransferase MoeB -
  D9779_RS08640 glp 1674102..1675394 (+) 1293 WP_121642488.1 gephyrin-like molybdotransferase Glp -
  D9779_RS08645 mobB 1675355..1675876 (+) 522 WP_121642489.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 197 a.a.        Molecular weight: 22417.48 Da        Isoelectric Point: 9.4946

>NTDB_id=320854 D9779_RS08620 WP_010328488.1 1670680..1671273(+) (rok) [Bacillus vallismortis strain Bac111]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDLRSEKKPDSLPVLAELAAQEIRSYQPPS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESVEPAESTNE

Nucleotide


Download         Length: 594 bp        

>NTDB_id=320854 D9779_RS08620 WP_010328488.1 1670680..1671273(+) (rok) [Bacillus vallismortis strain Bac111]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATCGAACGTGATAAAATATACGCAAAATTAAGAGAGTTGGACAGAAATGGAAGCCCTTCTGAAATCAAAAAGGATTTAC
GTTCTGAAAAAAAACCAGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAGATCAGAAGCTATCAGCCGCCGTCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGTACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGAGAGAAGCTGCCATTAAAACTTTAAAGCGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTCATGCAA
AGCCTAATTAAAATGTATCCGGAAGTGAAAAAGCCGTATCGCGGCCAGTATATTTTAGAAGGCGAAATCGAATCTGCAGA
ATCAGTTGAACCTGCGGAATCAACAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

98.413

95.939

0.944

Multiple sequence alignment