Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   D9779_RS08520 Genome accession   NZ_CP033052
Coordinates   1654826..1655290 (-) Length   154 a.a.
NCBI ID   WP_010328508.1    Uniprot ID   -
Organism   Bacillus vallismortis strain Bac111     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1649826..1660290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9779_RS08500 kinA 1650291..1652111 (+) 1821 WP_121642475.1 sporulation histidine kinase KinA -
  D9779_RS08505 - 1652121..1653302 (-) 1182 WP_039073777.1 aminotransferase A -
  D9779_RS08510 - 1653504..1653665 (-) 162 WP_010328510.1 hypothetical protein -
  D9779_RS08515 cheV 1653872..1654783 (+) 912 WP_121642476.1 chemotaxis protein CheV -
  D9779_RS08520 kre 1654826..1655290 (-) 465 WP_010328508.1 YkyB family protein Regulator
  D9779_RS08525 - 1655416..1656708 (-) 1293 WP_121642477.1 MFS transporter -
  D9779_RS08530 - 1656784..1657278 (-) 495 WP_082246298.1 L,D-transpeptidase family protein -
  D9779_RS08535 - 1657336..1658196 (-) 861 WP_121642478.1 metallophosphoesterase -
  D9779_RS08540 fadH 1658340..1659104 (+) 765 WP_010328505.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17899.69 Da        Isoelectric Point: 10.3545

>NTDB_id=320853 D9779_RS08520 WP_010328508.1 1654826..1655290(-) (kre) [Bacillus vallismortis strain Bac111]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVANRQQPTYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=320853 D9779_RS08520 WP_010328508.1 1654826..1655290(-) (kre) [Bacillus vallismortis strain Bac111]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCTAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACGAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAGGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTTGTGG
CAAATCGCCAGCAGCCAACTTATCATAAACCCGTCTTTAAAAAACTCGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

98.701

100

0.987

Multiple sequence alignment