Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   D9779_RS07000 Genome accession   NZ_CP033052
Coordinates   1371103..1371294 (+) Length   63 a.a.
NCBI ID   WP_010329363.1    Uniprot ID   A0AAP3CFC8
Organism   Bacillus vallismortis strain Bac111     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1366103..1376294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9779_RS06970 argF 1366964..1367923 (+) 960 WP_121642310.1 ornithine carbamoyltransferase -
  D9779_RS06975 - 1368008..1368187 (+) 180 WP_010329358.1 YjzC family protein -
  D9779_RS06980 - 1368236..1368430 (-) 195 WP_010329359.1 YjzD family protein -
  D9779_RS06985 - 1368678..1369412 (+) 735 WP_121642311.1 hypothetical protein -
  D9779_RS06990 - 1369493..1370044 (+) 552 WP_010329361.1 hypothetical protein -
  D9779_RS06995 med 1370135..1371088 (+) 954 WP_121642312.1 transcriptional regulator Med Regulator
  D9779_RS07000 comZ 1371103..1371294 (+) 192 WP_010329363.1 ComG operon transcriptional repressor ComZ Regulator
  D9779_RS07005 - 1371324..1371527 (-) 204 WP_082246335.1 hypothetical protein -
  D9779_RS07010 fabH 1371716..1372654 (+) 939 WP_010329365.1 beta-ketoacyl-ACP synthase III -
  D9779_RS07015 fabF 1372677..1373918 (+) 1242 WP_121642313.1 beta-ketoacyl-ACP synthase II -
  D9779_RS07020 - 1373994..1374779 (+) 786 WP_010329367.1 DUF2268 domain-containing protein -
  D9779_RS07025 appD 1374970..1375956 (+) 987 WP_121642314.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7232.31 Da        Isoelectric Point: 4.2564

>NTDB_id=320847 D9779_RS07000 WP_010329363.1 1371103..1371294(+) (comZ) [Bacillus vallismortis strain Bac111]
MQHEKSMEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=320847 D9779_RS07000 WP_010329363.1 1371103..1371294(+) (comZ) [Bacillus vallismortis strain Bac111]
ATGCAACATGAAAAATCCATGGAGTTCTTGCAAATTGCCATGAAATACTTGCCTGAAGCGAAAGAACAGCTTGAAAAATC
AGGCATTGAGCTGTCAATGGAGGCCATACAGCCATTTATGAATCTATTTACCACGGTAATGGCTGAAGCTTATGAGCTTG
GCAAGTCTGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

98.413

100

0.984

Multiple sequence alignment