Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | D9780_RS19010 | Genome accession | NZ_CP033048 |
| Coordinates | 4083351..4084724 (+) | Length | 457 a.a. |
| NCBI ID | WP_073012506.1 | Uniprot ID | A0A3E0WJY4 |
| Organism | Virgibacillus sp. Bac330 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 4078351..4089724
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9780_RS18995 | - | 4078596..4079144 (+) | 549 | WP_116279118.1 | UvrB/UvrC motif-containing protein | - |
| D9780_RS19000 | - | 4079141..4080205 (+) | 1065 | WP_121641183.1 | protein arginine kinase | - |
| D9780_RS19005 | clpC | 4080224..4082650 (+) | 2427 | WP_073012503.1 | ATP-dependent protease ATP-binding subunit ClpC | - |
| D9780_RS19010 | radA | 4083351..4084724 (+) | 1374 | WP_073012506.1 | DNA repair protein RadA | Machinery gene |
| D9780_RS19015 | - | 4084934..4086031 (+) | 1098 | WP_073012680.1 | PIN/TRAM domain-containing protein | - |
| D9780_RS19020 | gltX | 4086338..4087807 (+) | 1470 | WP_116279121.1 | glutamate--tRNA ligase | - |
| D9780_RS19025 | cysE | 4088586..4089248 (+) | 663 | WP_073012511.1 | serine O-acetyltransferase | - |
Sequence
Protein
Download Length: 457 a.a. Molecular weight: 50053.53 Da Isoelectric Point: 7.9503
>NTDB_id=320776 D9780_RS19010 WP_073012506.1 4083351..4084724(+) (radA) [Virgibacillus sp. Bac330]
MAKRKTKFVCQECGYEVAKWLGKCPGCNNWNTFVEEIEITGGRQKQSFQTGNRSVGKPEKITAIKSQQEPRVTTDMKEFN
RVLGGGIVPGSLVLVGGDPGIGKSTLLLQISSQLADKSLSVLYISGEESTRQTKLRADRLGVTSDELYVLAETNLLDIAN
QIEAIKPSFVVIDSIQTVYREEITSAPGSVSQVRECTSELMKIAKTNGIPIFIVGHVTKEGTIAGPRLLEHMVDAVLYFE
GERHHTYRILRGVKNRFGSTNEMGIFEMKEAGLREVLNPSEIFLEERSQGASGSTVVASMEGTRPVLVEIQALISPTAFG
NPRRMATGVDQNRVPLLMAVLEKRVGLMLQNQDAYIKVAGGVRLDEPAIDLAIAVSIASSFRDQPTKPEDIFIGEVGLTG
EIRRVSRIEQRVQEAAKLGFKRVICPKNNLGGWTTPNNIEIIGVNTVQEALQIGVSR
MAKRKTKFVCQECGYEVAKWLGKCPGCNNWNTFVEEIEITGGRQKQSFQTGNRSVGKPEKITAIKSQQEPRVTTDMKEFN
RVLGGGIVPGSLVLVGGDPGIGKSTLLLQISSQLADKSLSVLYISGEESTRQTKLRADRLGVTSDELYVLAETNLLDIAN
QIEAIKPSFVVIDSIQTVYREEITSAPGSVSQVRECTSELMKIAKTNGIPIFIVGHVTKEGTIAGPRLLEHMVDAVLYFE
GERHHTYRILRGVKNRFGSTNEMGIFEMKEAGLREVLNPSEIFLEERSQGASGSTVVASMEGTRPVLVEIQALISPTAFG
NPRRMATGVDQNRVPLLMAVLEKRVGLMLQNQDAYIKVAGGVRLDEPAIDLAIAVSIASSFRDQPTKPEDIFIGEVGLTG
EIRRVSRIEQRVQEAAKLGFKRVICPKNNLGGWTTPNNIEIIGVNTVQEALQIGVSR
Nucleotide
Download Length: 1374 bp
>NTDB_id=320776 D9780_RS19010 WP_073012506.1 4083351..4084724(+) (radA) [Virgibacillus sp. Bac330]
TTGGCGAAGCGTAAAACGAAATTTGTTTGTCAGGAATGTGGGTATGAAGTAGCAAAATGGCTTGGGAAGTGTCCCGGTTG
TAACAATTGGAATACGTTTGTAGAAGAGATTGAAATTACTGGTGGGAGACAAAAGCAGTCCTTTCAAACAGGTAATAGGT
CAGTAGGAAAGCCTGAAAAAATTACAGCAATTAAATCACAACAAGAACCGAGAGTGACAACAGATATGAAAGAGTTTAAC
CGTGTGCTCGGCGGCGGCATTGTACCAGGCTCTCTCGTTCTAGTTGGTGGGGATCCAGGTATTGGAAAGTCTACCCTATT
ATTGCAAATATCATCTCAATTGGCAGATAAAAGTTTGTCTGTTTTATATATTTCCGGAGAAGAATCAACGAGACAGACGA
AGTTGCGTGCTGATCGTTTAGGTGTAACTTCCGACGAGTTATATGTGTTAGCAGAAACAAATTTACTTGATATAGCAAAT
CAAATTGAAGCAATAAAACCATCATTTGTCGTTATTGATTCTATTCAAACGGTCTATCGTGAAGAGATTACGAGTGCACC
GGGCAGTGTTTCTCAAGTAAGAGAATGTACATCTGAATTAATGAAAATCGCTAAAACGAATGGAATACCCATCTTTATTG
TGGGACACGTGACGAAAGAGGGGACGATTGCTGGCCCAAGACTCCTAGAGCATATGGTGGACGCTGTGCTATATTTTGAA
GGGGAGCGTCATCATACGTACCGCATTTTAAGAGGTGTGAAAAATCGGTTTGGTAGTACGAATGAAATGGGCATCTTTGA
GATGAAGGAGGCAGGGCTACGCGAAGTTTTAAATCCTTCAGAAATATTTTTGGAAGAACGTTCACAAGGAGCTTCGGGGT
CTACCGTCGTAGCTTCTATGGAGGGAACAAGACCAGTATTGGTAGAGATACAGGCATTAATCTCTCCTACAGCGTTTGGT
AACCCTCGTAGAATGGCGACAGGAGTAGATCAGAACCGTGTTCCACTACTGATGGCAGTGTTAGAAAAGCGTGTCGGTTT
AATGCTGCAAAACCAAGATGCATATATTAAAGTTGCTGGTGGTGTTAGACTTGATGAACCTGCCATTGACTTAGCAATTG
CTGTTAGTATTGCTTCTAGCTTCCGTGATCAACCAACAAAGCCGGAAGATATTTTTATTGGGGAAGTTGGACTGACGGGA
GAGATAAGACGGGTATCTCGCATTGAACAACGTGTTCAAGAAGCTGCCAAACTAGGATTTAAACGCGTTATCTGTCCTAA
AAATAATTTAGGAGGTTGGACAACGCCAAATAACATCGAAATTATCGGTGTAAACACGGTACAAGAAGCATTACAAATCG
GGGTAAGTAGATAA
TTGGCGAAGCGTAAAACGAAATTTGTTTGTCAGGAATGTGGGTATGAAGTAGCAAAATGGCTTGGGAAGTGTCCCGGTTG
TAACAATTGGAATACGTTTGTAGAAGAGATTGAAATTACTGGTGGGAGACAAAAGCAGTCCTTTCAAACAGGTAATAGGT
CAGTAGGAAAGCCTGAAAAAATTACAGCAATTAAATCACAACAAGAACCGAGAGTGACAACAGATATGAAAGAGTTTAAC
CGTGTGCTCGGCGGCGGCATTGTACCAGGCTCTCTCGTTCTAGTTGGTGGGGATCCAGGTATTGGAAAGTCTACCCTATT
ATTGCAAATATCATCTCAATTGGCAGATAAAAGTTTGTCTGTTTTATATATTTCCGGAGAAGAATCAACGAGACAGACGA
AGTTGCGTGCTGATCGTTTAGGTGTAACTTCCGACGAGTTATATGTGTTAGCAGAAACAAATTTACTTGATATAGCAAAT
CAAATTGAAGCAATAAAACCATCATTTGTCGTTATTGATTCTATTCAAACGGTCTATCGTGAAGAGATTACGAGTGCACC
GGGCAGTGTTTCTCAAGTAAGAGAATGTACATCTGAATTAATGAAAATCGCTAAAACGAATGGAATACCCATCTTTATTG
TGGGACACGTGACGAAAGAGGGGACGATTGCTGGCCCAAGACTCCTAGAGCATATGGTGGACGCTGTGCTATATTTTGAA
GGGGAGCGTCATCATACGTACCGCATTTTAAGAGGTGTGAAAAATCGGTTTGGTAGTACGAATGAAATGGGCATCTTTGA
GATGAAGGAGGCAGGGCTACGCGAAGTTTTAAATCCTTCAGAAATATTTTTGGAAGAACGTTCACAAGGAGCTTCGGGGT
CTACCGTCGTAGCTTCTATGGAGGGAACAAGACCAGTATTGGTAGAGATACAGGCATTAATCTCTCCTACAGCGTTTGGT
AACCCTCGTAGAATGGCGACAGGAGTAGATCAGAACCGTGTTCCACTACTGATGGCAGTGTTAGAAAAGCGTGTCGGTTT
AATGCTGCAAAACCAAGATGCATATATTAAAGTTGCTGGTGGTGTTAGACTTGATGAACCTGCCATTGACTTAGCAATTG
CTGTTAGTATTGCTTCTAGCTTCCGTGATCAACCAACAAAGCCGGAAGATATTTTTATTGGGGAAGTTGGACTGACGGGA
GAGATAAGACGGGTATCTCGCATTGAACAACGTGTTCAAGAAGCTGCCAAACTAGGATTTAAACGCGTTATCTGTCCTAA
AAATAATTTAGGAGGTTGGACAACGCCAAATAACATCGAAATTATCGGTGTAAACACGGTACAAGAAGCATTACAAATCG
GGGTAAGTAGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Bacillus subtilis subsp. subtilis str. 168 |
74.172 |
99.125 |
0.735 |
| radA | Streptococcus pneumoniae Rx1 |
63.717 |
98.906 |
0.63 |
| radA | Streptococcus pneumoniae D39 |
63.717 |
98.906 |
0.63 |
| radA | Streptococcus pneumoniae R6 |
63.717 |
98.906 |
0.63 |
| radA | Streptococcus pneumoniae TIGR4 |
63.717 |
98.906 |
0.63 |
| radA | Streptococcus mitis NCTC 12261 |
63.717 |
98.906 |
0.63 |
| radA | Streptococcus mitis SK321 |
63.717 |
98.906 |
0.63 |