Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   D9829_RS20510 Genome accession   NZ_CP033044
Coordinates   4172163..4173929 (+) Length   588 a.a.
NCBI ID   WP_121612760.1    Uniprot ID   -
Organism   Mesobacillus foraminis strain Bac44     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 4167163..4178929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9829_RS20485 - 4167854..4168342 (+) 489 WP_121612755.1 GyrI-like domain-containing protein -
  D9829_RS20490 - 4169062..4169838 (+) 777 WP_121612756.1 TerC family protein -
  D9829_RS20495 - 4170300..4170572 (+) 273 WP_121612757.1 CPCC family cysteine-rich protein -
  D9829_RS20500 - 4170799..4171161 (+) 363 WP_121612758.1 hypothetical protein -
  D9829_RS20505 - 4171640..4172065 (+) 426 WP_121612759.1 MarR family winged helix-turn-helix transcriptional regulator -
  D9829_RS20510 rcrP 4172163..4173929 (+) 1767 WP_121612760.1 ABC transporter ATP-binding protein Regulator
  D9829_RS20515 rcrQ 4173991..4175760 (+) 1770 WP_121614020.1 ABC transporter ATP-binding protein Regulator
  D9829_RS20520 - 4175871..4176470 (+) 600 WP_306822071.1 dienelactone hydrolase family protein -
  D9829_RS20525 - 4176503..4177021 (+) 519 WP_121612761.1 GNAT family N-acetyltransferase -
  D9829_RS20530 - 4177471..4178217 (+) 747 WP_121612762.1 MurR/RpiR family transcriptional regulator -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65247.13 Da        Isoelectric Point: 6.7657

>NTDB_id=320698 D9829_RS20510 WP_121612760.1 4172163..4173929(+) (rcrP) [Mesobacillus foraminis strain Bac44]
MVRIFKYFEKKEWLLVVCSLVFIVTQVWLDLKLPDYMHEITMLVQTEGSRMSDVLLQGIYMILCAIGSMAAAMLVGFFAA
KVAAGFSVRLRGMVFDKTMSFSMEEINGFSTSSLITRSTNDITQIQLLIAMGLQAIVKAPILAVWAIFKIMGKSWQWTAA
TGFAVGFLILMLSIIIFVALPKFKMIQSLTDNLNMVTRENLTGIRVVHAYNAERYQEEKFEKANNDLTKTNLFTNRTMAI
MMPTMGLIMSGISLAIYWIGAFLINDAAAPDKLTLFSDMVVFSSYAMQVIMAFMMLSIVFIMLPRASVSAKRINEVLDTK
TKIDDGGLAEGEIGLAGEVEFRNVSFKYPDASEYILHNISFTAHKGETVAFIGSTGSGKSTLINLIPRFYDATEGEVLVD
GVNVKNYTQEALHNKLGYVSQKAILFSGTVSSNVAYGDIGKKNSKNETAIRKAVEIAQGTEFIEKMEGQYEGSIAQGGTN
LSGGQKQRLSIARAIYKNPEIYLFDDSFSALDYRTDRVLRSLIKKEIKEATKLIVAQRIGTIKDADRIIVLDEGKIAGIG
THDELMLNCGVYQEIAYSQLSKEELEIG

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=320698 D9829_RS20510 WP_121612760.1 4172163..4173929(+) (rcrP) [Mesobacillus foraminis strain Bac44]
ATGGTGAGGATTTTTAAATATTTTGAGAAAAAGGAATGGCTGCTGGTTGTGTGCAGTCTGGTGTTCATCGTGACACAGGT
GTGGCTTGACTTAAAGCTGCCTGATTATATGCATGAAATTACGATGCTTGTCCAGACAGAAGGAAGCAGGATGAGCGATG
TTCTCCTGCAAGGCATCTATATGATTTTATGTGCCATTGGAAGCATGGCGGCTGCCATGCTGGTTGGCTTTTTTGCTGCG
AAAGTTGCTGCGGGGTTTTCAGTACGCCTGCGTGGAATGGTGTTTGACAAGACGATGAGTTTTTCGATGGAGGAAATCAA
TGGTTTCTCCACTTCCAGTTTGATTACACGCTCGACGAATGATATTACGCAAATCCAGCTGCTCATTGCAATGGGTCTTC
AGGCAATTGTAAAAGCTCCGATTCTCGCAGTCTGGGCGATTTTTAAAATTATGGGGAAAAGCTGGCAATGGACTGCAGCA
ACGGGTTTTGCCGTAGGCTTCCTGATCCTCATGCTCTCGATCATTATTTTTGTGGCGCTGCCGAAATTCAAGATGATTCA
AAGCCTGACGGATAACCTGAATATGGTGACAAGGGAAAACCTTACAGGCATTCGAGTGGTCCATGCCTACAATGCGGAAA
GGTATCAAGAAGAAAAATTTGAAAAGGCGAACAACGACCTTACAAAGACCAATCTATTTACCAACCGGACAATGGCGATC
ATGATGCCGACCATGGGCCTTATAATGTCGGGTATCAGTCTCGCAATCTACTGGATCGGGGCCTTCCTGATTAATGATGC
GGCTGCACCCGATAAACTTACCTTGTTCTCGGATATGGTTGTATTCTCCTCCTATGCAATGCAGGTAATTATGGCCTTTA
TGATGCTGTCCATTGTATTTATCATGCTCCCGCGGGCTTCCGTTTCCGCTAAACGGATTAACGAGGTGCTGGATACCAAA
ACAAAGATAGACGATGGCGGTTTGGCCGAAGGGGAAATAGGGCTTGCCGGGGAAGTAGAATTCCGTAATGTCAGTTTTAA
ATATCCAGATGCAAGTGAATACATCCTTCATAATATCAGCTTTACTGCGCATAAGGGGGAAACGGTGGCCTTTATCGGCT
CAACCGGAAGCGGGAAAAGCACTCTGATCAACCTGATTCCACGATTCTATGATGCAACAGAAGGGGAAGTTCTCGTTGAC
GGAGTCAACGTGAAAAATTACACCCAGGAGGCACTCCACAACAAGCTCGGGTATGTATCGCAAAAAGCAATATTGTTCAG
CGGTACCGTTTCTTCCAATGTGGCCTATGGGGATATTGGGAAGAAGAACTCAAAAAATGAAACGGCCATCAGGAAGGCGG
TAGAAATAGCACAGGGCACTGAATTTATTGAAAAGATGGAAGGTCAGTATGAGGGAAGCATAGCCCAGGGCGGCACCAAT
TTATCCGGCGGACAGAAGCAAAGGCTGTCTATCGCACGCGCTATCTATAAAAATCCTGAAATTTATCTGTTTGATGATTC
ATTTTCTGCGCTTGATTATAGGACAGATCGAGTACTGCGGTCCCTGATAAAAAAAGAAATAAAAGAAGCGACAAAACTGA
TTGTTGCCCAGCGGATTGGCACCATAAAGGATGCGGACCGCATTATTGTGCTCGACGAAGGCAAAATCGCCGGAATAGGT
ACACATGACGAGCTCATGCTGAACTGTGGCGTTTACCAGGAAATCGCCTACTCTCAGTTGTCAAAGGAGGAACTCGAAAT
TGGCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(20-293)

ABC transporter (ABC_tran)

(356-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

54

100

0.551

Multiple sequence alignment