Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   D9842_RS23025 Genome accession   NZ_CP033043
Coordinates   4712525..4713322 (+) Length   265 a.a.
NCBI ID   WP_121664475.1    Uniprot ID   -
Organism   Metabacillus litoralis strain Bac94     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 4707525..4718322
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9842_RS26430 - 4707895..4708416 (-) 522 Protein_4478 N-acetylmuramoyl-L-alanine amidase family protein -
  D9842_RS23000 - 4708696..4708890 (-) 195 WP_121664471.1 YfhD family protein -
  D9842_RS23005 - 4708967..4709095 (-) 129 WP_098798575.1 YfhE family protein -
  D9842_RS23010 - 4709218..4709775 (-) 558 WP_121664472.1 GNAT family N-acetyltransferase -
  D9842_RS23015 - 4710311..4711438 (-) 1128 WP_121664473.1 amidohydrolase -
  D9842_RS23020 - 4711506..4712408 (-) 903 WP_121664474.1 TIGR01777 family oxidoreductase -
  D9842_RS23025 recX 4712525..4713322 (+) 798 WP_121664475.1 recombination regulator RecX Regulator
  D9842_RS23030 - 4713344..4713661 (+) 318 WP_121664476.1 YfhH family protein -
  D9842_RS23035 - 4713714..4713878 (-) 165 WP_121664477.1 small, acid-soluble spore protein K -
  D9842_RS23040 - 4713986..4714255 (+) 270 WP_121664478.1 YfhJ family protein -
  D9842_RS23045 - 4714308..4715288 (-) 981 WP_121664479.1 metal-dependent hydrolase -
  D9842_RS23050 mutY 4715526..4716626 (+) 1101 WP_121664480.1 A/G-specific adenine glycosylase -
  D9842_RS23055 - 4716643..4716867 (-) 225 WP_098798584.1 hypothetical protein -
  D9842_RS23060 fabL 4716996..4717751 (+) 756 WP_121664481.1 enoyl-[acyl-carrier-protein] reductase FabL -
  D9842_RS23065 - 4717873..4718073 (+) 201 WP_121664482.1 gamma-type small acid-soluble spore protein -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 31239.56 Da        Isoelectric Point: 5.9588

>NTDB_id=320637 D9842_RS23025 WP_121664475.1 4712525..4713322(+) (recX) [Metabacillus litoralis strain Bac94]
MAIITKITTQKQSDERYNIFLDDGTGEKYAFSVDQDILIKHNLQKGKELDEFDIVEIKYGDDRKKAYNKALEFLSYRMRS
VKEVEDHLAKKEYHESVIKEVIAKLKEFNYVDDFEFALAYVRTQKQTNGKGPTVLTRELAMKGIGQSIVEQVLEEYNQDE
QIEEAVAHAEKLLKKNNKLSTIQLKQKIEQHLLRKGFSYNIISTALEEVDYEQDESEEWLALVKHAEKAQKKYQNEDPYH
YKMKMKQFLYRKGFAIELIEKFLSE

Nucleotide


Download         Length: 798 bp        

>NTDB_id=320637 D9842_RS23025 WP_121664475.1 4712525..4713322(+) (recX) [Metabacillus litoralis strain Bac94]
ATGGCAATTATTACAAAAATTACTACACAAAAGCAATCTGATGAAAGATACAATATTTTCCTCGATGATGGTACGGGGGA
AAAGTATGCTTTTAGCGTTGATCAAGACATTTTAATAAAACATAATCTTCAAAAAGGCAAAGAACTAGATGAATTTGATA
TCGTTGAGATAAAATATGGTGATGATAGAAAGAAGGCTTATAATAAGGCGTTAGAGTTCCTAAGTTATCGTATGCGCTCA
GTTAAAGAAGTAGAGGATCATTTGGCGAAAAAGGAATATCATGAATCGGTAATAAAGGAAGTCATCGCTAAATTAAAAGA
ATTTAACTATGTAGATGATTTTGAATTTGCACTAGCCTATGTGCGGACCCAGAAGCAAACAAATGGGAAAGGTCCTACTG
TATTAACTCGTGAATTGGCTATGAAAGGAATTGGACAATCTATAGTAGAACAGGTCTTGGAGGAATATAATCAAGATGAG
CAGATTGAAGAGGCCGTTGCTCATGCTGAAAAACTTTTGAAAAAAAATAATAAACTTTCAACGATTCAGCTTAAGCAAAA
AATCGAGCAGCATCTACTAAGAAAAGGGTTTTCCTATAATATCATTTCAACTGCGTTAGAGGAAGTCGACTATGAGCAAG
ATGAATCTGAAGAGTGGTTAGCGTTAGTTAAGCATGCGGAAAAGGCTCAGAAAAAATATCAAAATGAAGATCCTTATCAC
TACAAAATGAAAATGAAGCAGTTTTTATATAGAAAAGGTTTTGCGATAGAATTAATTGAAAAGTTTTTAAGTGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(88-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

56.981

100

0.57

Multiple sequence alignment