Detailed information NTG0320612

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: D9842_RS13205
• Genome accession: NZ_CP033043
• Coordinates: 2639141..2641495 (-)
• Length: 784 a.a.
• NCBI ID: WP_121662946.1
• Uniprot ID: -
• Organism: Metabacillus litoralis strain Bac94
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2634141..2646495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9842_RS13190	dtd	2635604..2636044 (-)	441	WP_121662943.1	D-aminoacyl-tRNA deacylase	-
D9842_RS13195	-	2636058..2638265 (-)	2208	WP_121662944.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	-
D9842_RS13200	-	2638612..2639124 (-)	513	WP_121662945.1	adenine phosphoribosyltransferase	-
D9842_RS13205	recJ	2639141..2641495 (-)	2355	WP_121662946.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
D9842_RS13210	-	2641583..2641927 (-)	345	WP_121662947.1	lipopolysaccharide assembly LapA domain-containing protein	-
D9842_RS13215	-	2641946..2642839 (-)	894	WP_121662948.1	cation diffusion facilitator family transporter	-
D9842_RS13220	secDF	2642978..2645221 (-)	2244	WP_121662949.1	protein translocase subunit SecDF	-
D9842_RS13225	-	2645358..2645651 (-)	294	WP_121665063.1	post-transcriptional regulator	-

Sequence

Protein

• Length: 784 a.a.
• Molecular weight: 88093.78 Da
• Isoelectric Point: 4.9821

>NTDB_id=320612 D9842_RS13205 WP_121662946.1 2639141..2641495(-) (recJ) [Metabacillus litoralis strain Bac94]
MLKAKTRWMVQSSDETLIETLIDNLSITPLVASLLVNRGIHSVEEAREFLETEKQSFHDPFLLKDMDKAVHRIKTAIEQN
EHILVYGDYDADGVSSTTVLLTALRTLGANVDFYIPNRFTEGYGPNEAAFRHAHEKGFSLIITVDTGIAAVHEAQVAKEL
GMDLIITDHHEPGPILPEALAIIHPKQPGCTYPFKELAGVGVAFKLSHALLGDVPTDLLEVAAIGTIADLVALHDENRLI
AKKGINQLKTTKRIGLKALLKIANVKMDEINEDTIGFALGPRINAVGRLQSADPAVDLLLSEDEEEASVIAEEIDLLNKE
RQKLVSTMTEEAIEEVETRFPIEDHPVLVIAREGWNPGVVGIVASRLVDRFYRPTIVLSIDREKGIAKGSARSIVGFDLF
ENLSTCRDILPHFGGHPMAAGMTLNLEDVDSLRERLVEKAKNILTENDFIPVTKVDVSCNLEDISVNSIEEMQLLSPFGM
NNPKPVIQIENVTLANVRKIGSEQNHLKLVFSQEDCQLDCVGFGMGYIHDELSPSVTLSAIGELSINEWNNLRKPQIMLQ
DIKVDEWQLFDFRGTRNVDKLVSSVTTLEESIIVTFEETTHDYVKNLGFEQKAMLVKTKQDALNLSVKNKHVILMDIPSS
LDHFDALFSEGKPARIYTVFQQDSDHFFSTIPTREHFKWYYGFLLKKGSFKLHEQGKQLAAHKGWTKETIEFMSQVFFEL
EFVTIENGVISTNSSTRKRDLTESKTYAQKQMRLELEKTLLYTSYMQLKQWFEERFPLDAPVGV

Nucleotide

• Length: 2355 bp

>NTDB_id=320612 D9842_RS13205 WP_121662946.1 2639141..2641495(-) (recJ) [Metabacillus litoralis strain Bac94]
ATGTTAAAGGCAAAAACAAGATGGATGGTTCAATCATCTGATGAAACCTTAATTGAAACACTTATTGATAACTTATCCAT
TACACCGTTAGTCGCATCTTTACTTGTAAATAGAGGCATACATTCAGTAGAAGAAGCACGCGAATTCTTGGAAACTGAAA
AACAATCTTTTCATGATCCGTTTCTTCTAAAAGATATGGACAAGGCTGTCCACCGAATAAAAACGGCGATAGAACAAAAT
GAGCATATATTAGTTTATGGAGATTATGATGCTGATGGAGTAAGCAGTACAACTGTATTATTAACAGCTTTACGTACTCT
GGGTGCAAACGTAGATTTCTATATTCCAAATCGATTTACCGAGGGTTATGGACCAAATGAAGCTGCTTTTAGACATGCAC
ATGAAAAGGGTTTTTCTTTAATCATTACAGTTGATACAGGAATTGCAGCTGTTCATGAAGCACAAGTGGCAAAAGAATTA
GGGATGGATTTGATTATTACAGACCACCATGAGCCAGGTCCGATTCTTCCAGAAGCACTTGCGATTATCCATCCAAAACA
ACCAGGATGTACCTATCCTTTTAAGGAGCTTGCTGGAGTTGGCGTTGCCTTTAAATTAAGTCATGCTCTGCTTGGTGATG
TTCCAACTGATTTATTAGAAGTAGCAGCAATAGGAACAATCGCAGATTTAGTAGCACTTCATGATGAAAATAGATTAATA
GCTAAAAAAGGTATAAACCAGTTAAAAACAACAAAACGTATTGGACTAAAAGCGTTATTAAAAATTGCCAATGTCAAGAT
GGATGAAATAAATGAGGATACGATAGGTTTTGCACTGGGGCCACGAATTAATGCAGTTGGTCGTTTACAATCAGCTGACC
CCGCCGTGGACCTTCTCCTTTCTGAAGATGAAGAGGAAGCTTCAGTTATTGCTGAGGAAATTGATTTGCTTAACAAAGAA
CGTCAGAAACTTGTTAGCACAATGACAGAAGAAGCAATCGAGGAGGTAGAAACTCGTTTTCCAATCGAGGATCATCCAGT
TCTTGTTATTGCTAGAGAAGGCTGGAATCCAGGTGTGGTGGGAATAGTTGCATCAAGGCTTGTAGACCGCTTTTATCGTC
CAACAATTGTTTTAAGCATTGATAGAGAAAAAGGAATTGCAAAAGGGTCAGCCCGAAGTATCGTTGGCTTTGATTTGTTT
GAAAATCTATCAACATGTCGCGATATTCTTCCGCATTTTGGAGGGCACCCCATGGCTGCAGGTATGACATTAAATCTGGA
AGATGTTGATTCACTACGAGAAAGACTTGTTGAAAAGGCAAAAAACATATTAACAGAAAATGATTTTATACCGGTAACAA
AAGTGGATGTAAGCTGTAATCTAGAAGATATTTCAGTTAATTCAATTGAAGAAATGCAACTTCTTTCACCCTTTGGTATG
AATAACCCTAAACCTGTCATTCAAATAGAGAATGTTACATTGGCAAATGTTCGAAAAATTGGTTCTGAACAAAATCATTT
AAAGCTGGTTTTTTCGCAAGAAGATTGTCAGCTTGATTGCGTTGGGTTTGGTATGGGGTATATCCATGATGAACTTTCAC
CCTCTGTTACTTTATCGGCAATTGGGGAATTATCTATTAATGAGTGGAATAATCTTCGCAAACCCCAAATCATGTTACAA
GATATCAAGGTTGATGAGTGGCAGTTGTTCGATTTTAGAGGAACAAGAAATGTCGACAAGCTAGTGAGTTCAGTGACAAC
TTTAGAAGAGAGCATCATTGTTACTTTTGAGGAAACAACGCATGATTACGTGAAGAATTTAGGCTTCGAACAAAAAGCAA
TGTTAGTAAAAACAAAACAAGATGCCCTAAATCTATCTGTTAAAAATAAACATGTTATTTTAATGGATATTCCATCATCA
CTTGATCATTTTGATGCGCTTTTTTCTGAAGGAAAGCCAGCAAGAATTTACACAGTGTTTCAACAGGATTCAGATCACTT
CTTTTCAACGATTCCAACAAGAGAACACTTTAAATGGTATTATGGATTTCTGTTAAAGAAAGGCTCTTTCAAGCTCCATG
AGCAAGGTAAACAACTTGCGGCTCACAAGGGATGGACAAAAGAAACAATTGAGTTCATGTCACAGGTGTTTTTTGAACTA
GAATTTGTTACAATAGAAAATGGTGTTATTTCGACAAATTCTTCAACTCGAAAACGAGATTTAACAGAATCGAAAACATA
TGCCCAAAAACAAATGAGATTAGAATTAGAAAAAACGTTATTATATACATCTTACATGCAGCTTAAGCAGTGGTTTGAAG
AAAGATTTCCATTAGATGCGCCTGTAGGTGTATAA

Domains

Predicted by InterproScan.

• DHH family (DHH) (82-226)

• RecJ OB domain (RecJ_OB) (455-561)

• DHHA1 domain (DHHA1) (317-438)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (568-772)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Bacillus subtilis subsp. subtilis str. 168	58.333	99.49	0.58