Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   LLKF_RS02295 Genome accession   NC_013656
Coordinates   449916..450698 (+) Length   260 a.a.
NCBI ID   WP_012897232.1    Uniprot ID   -
Organism   Lactococcus lactis subsp. lactis KF147     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 444916..455698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLKF_RS02270 (LLKF_0447) vicX 444939..445751 (-) 813 WP_012897228.1 MBL fold metallo-hydrolase Regulator
  LLKF_RS02275 (LLKF_0448) vicK 445922..447364 (-) 1443 WP_012897229.1 sensor histidine kinase Regulator
  LLKF_RS02280 (LLKF_0449) yycF 447357..448058 (-) 702 WP_003131580.1 response regulator YycF -
  LLKF_RS02285 (LLKF_0450) tmk 448236..448871 (+) 636 WP_012897230.1 dTMP kinase -
  LLKF_RS02290 (LLKF_0451) - 449004..449864 (+) 861 WP_012897231.1 DNA polymerase III subunit delta' -
  LLKF_RS02295 (LLKF_0452) yaaT 449916..450698 (+) 783 WP_012897232.1 PSP1 domain-containing protein Regulator
  LLKF_RS02300 (LLKF_0453) yabA 450691..451017 (+) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  LLKF_RS02305 (LLKF_0454) rsmI 451017..451892 (+) 876 WP_012897233.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  LLKF_RS02310 (LLKF_0455) - 451969..452160 (-) 192 WP_012897234.1 hypothetical protein -
  LLKF_RS02315 (LLKF_0456) mvk 452223..453155 (-) 933 WP_003131564.1 mevalonate kinase -
  LLKF_RS02320 (LLKF_0457) mvaD 453462..454418 (+) 957 WP_012897235.1 diphosphomevalonate decarboxylase -
  LLKF_RS02325 (LLKF_0458) - 454405..455394 (+) 990 WP_012897236.1 mevalonate kinase family protein -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29885.33 Da        Isoelectric Point: 5.7927

>NTDB_id=32059 LLKF_RS02295 WP_012897232.1 449916..450698(+) (yaaT) [Lactococcus lactis subsp. lactis KF147]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANFEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQDLEMKIIDVAYNFDQMQLFISFTAQNRVDFRLLLRELATTFRIRIELRQIGPRDAAKIQGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=32059 LLKF_RS02295 WP_012897232.1 449916..450698(+) (yaaT) [Lactococcus lactis subsp. lactis KF147]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATTTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGATTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCACAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCAGGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGTGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACTTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

45.662

84.231

0.385

Multiple sequence alignment