Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | D9M09_RS02405 | Genome accession | NZ_CP033019 |
| Coordinates | 506420..507475 (-) | Length | 351 a.a. |
| NCBI ID | WP_070222514.1 | Uniprot ID | - |
| Organism | Janthinobacterium agaricidamnosum strain BHSEK | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 501420..512475
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9M09_RS02375 (D9M09_02375) | - | 502113..502460 (+) | 348 | WP_070222526.1 | antibiotic biosynthesis monooxygenase | - |
| D9M09_RS02380 (D9M09_02380) | - | 502457..502909 (-) | 453 | WP_070222524.1 | hypothetical protein | - |
| D9M09_RS02385 (D9M09_02385) | - | 503091..503357 (+) | 267 | WP_070290134.1 | hypothetical protein | - |
| D9M09_RS02390 (D9M09_02390) | rpoH | 503447..504346 (-) | 900 | WP_170932923.1 | RNA polymerase sigma factor RpoH | - |
| D9M09_RS02395 (D9M09_02395) | ftsX | 504751..505671 (-) | 921 | WP_070222518.1 | permease-like cell division protein FtsX | - |
| D9M09_RS02400 (D9M09_02400) | - | 505668..506411 (-) | 744 | WP_070312921.1 | ATP-binding cassette domain-containing protein | - |
| D9M09_RS02405 (D9M09_02405) | pilA | 506420..507475 (-) | 1056 | WP_070222514.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| D9M09_RS02410 (D9M09_02410) | - | 507640..508581 (-) | 942 | WP_121668493.1 | MerR family transcriptional regulator | - |
| D9M09_RS02415 (D9M09_02415) | - | 508786..510099 (+) | 1314 | WP_070222510.1 | FAD-dependent oxidoreductase | - |
| D9M09_RS02420 (D9M09_02420) | - | 510089..510886 (+) | 798 | WP_121668494.1 | DUF1365 domain-containing protein | - |
| D9M09_RS02425 (D9M09_02425) | - | 510967..512130 (+) | 1164 | WP_121670939.1 | cyclopropane-fatty-acyl-phospholipid synthase family protein | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 37327.62 Da Isoelectric Point: 6.8952
>NTDB_id=320491 D9M09_RS02405 WP_070222514.1 506420..507475(-) (pilA) [Janthinobacterium agaricidamnosum strain BHSEK]
MFSFFKKKPIAPEATPAEPLVLPATPPAPQPAATPLSGAPAELVPVVVAAEPEKKSWMTRLKAGLSKTSNTLSVLFVGAK
IDDALYEELEAALLMSDAGIDATEFLLTELKKKVKEDKLLDAAAVKAALKVLLIELLSPLEKRFELGRHKPLVMMISGVN
GAGKTTTIGKLAKHMQSNNQSVLLAAGDTFRAAAREQLMVWGERNNVTVISQESGDPAAVAYDSVQSAKARGIDVVMVDT
AGRLPTQLHLMEELKKIKRVIGKGMEGAPHETLLVIDGNTGQNALTQVKAFDDALQLSGLVITKLDGTAKGGVLAAIARV
RPVPVYFIGIGEKIEDLQPFVAAEFVEALLG
MFSFFKKKPIAPEATPAEPLVLPATPPAPQPAATPLSGAPAELVPVVVAAEPEKKSWMTRLKAGLSKTSNTLSVLFVGAK
IDDALYEELEAALLMSDAGIDATEFLLTELKKKVKEDKLLDAAAVKAALKVLLIELLSPLEKRFELGRHKPLVMMISGVN
GAGKTTTIGKLAKHMQSNNQSVLLAAGDTFRAAAREQLMVWGERNNVTVISQESGDPAAVAYDSVQSAKARGIDVVMVDT
AGRLPTQLHLMEELKKIKRVIGKGMEGAPHETLLVIDGNTGQNALTQVKAFDDALQLSGLVITKLDGTAKGGVLAAIARV
RPVPVYFIGIGEKIEDLQPFVAAEFVEALLG
Nucleotide
Download Length: 1056 bp
>NTDB_id=320491 D9M09_RS02405 WP_070222514.1 506420..507475(-) (pilA) [Janthinobacterium agaricidamnosum strain BHSEK]
ATGTTTAGTTTCTTCAAGAAAAAACCCATCGCTCCCGAGGCCACACCAGCCGAGCCCCTCGTCCTTCCCGCCACGCCGCC
CGCACCGCAGCCAGCCGCTACGCCCCTGAGCGGCGCGCCGGCCGAGCTCGTGCCCGTGGTCGTGGCCGCCGAACCCGAGA
AAAAATCGTGGATGACGCGCCTGAAGGCGGGCCTGTCGAAAACCTCGAACACCTTGTCCGTGCTGTTCGTCGGCGCGAAG
ATCGACGACGCCCTGTACGAAGAGCTGGAAGCGGCGCTGCTGATGTCCGACGCCGGCATCGACGCCACCGAATTCCTGCT
CACGGAATTGAAGAAAAAGGTCAAGGAAGACAAGCTGCTCGACGCAGCCGCCGTCAAGGCCGCGCTGAAAGTGCTGCTGA
TCGAGCTCCTGAGCCCGCTGGAAAAGCGCTTCGAGCTGGGCCGCCACAAGCCGCTGGTGATGATGATTTCCGGCGTCAAT
GGCGCCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGCACATGCAGTCGAACAACCAGTCCGTGCTGCTGGCCGCGGG
CGACACCTTCCGCGCCGCCGCGCGCGAGCAGTTGATGGTCTGGGGCGAGCGCAACAACGTTACCGTGATTTCGCAAGAAT
CGGGCGACCCGGCCGCCGTGGCCTACGACTCCGTGCAATCGGCGAAGGCGCGCGGCATCGACGTGGTCATGGTCGACACG
GCCGGCCGCCTGCCGACCCAGTTGCACTTGATGGAAGAATTGAAGAAAATCAAGCGCGTGATCGGCAAGGGCATGGAGGG
CGCGCCGCATGAAACCCTGCTCGTCATCGACGGCAACACGGGTCAGAACGCCCTCACGCAAGTGAAGGCCTTCGACGATG
CCCTGCAGTTGAGCGGCCTGGTGATCACCAAGCTGGACGGTACCGCCAAGGGCGGGGTTCTGGCGGCGATTGCCCGCGTG
CGCCCCGTGCCCGTGTATTTCATCGGCATCGGTGAGAAAATTGAAGACTTGCAGCCCTTCGTGGCTGCCGAATTTGTCGA
AGCGCTGCTCGGATAA
ATGTTTAGTTTCTTCAAGAAAAAACCCATCGCTCCCGAGGCCACACCAGCCGAGCCCCTCGTCCTTCCCGCCACGCCGCC
CGCACCGCAGCCAGCCGCTACGCCCCTGAGCGGCGCGCCGGCCGAGCTCGTGCCCGTGGTCGTGGCCGCCGAACCCGAGA
AAAAATCGTGGATGACGCGCCTGAAGGCGGGCCTGTCGAAAACCTCGAACACCTTGTCCGTGCTGTTCGTCGGCGCGAAG
ATCGACGACGCCCTGTACGAAGAGCTGGAAGCGGCGCTGCTGATGTCCGACGCCGGCATCGACGCCACCGAATTCCTGCT
CACGGAATTGAAGAAAAAGGTCAAGGAAGACAAGCTGCTCGACGCAGCCGCCGTCAAGGCCGCGCTGAAAGTGCTGCTGA
TCGAGCTCCTGAGCCCGCTGGAAAAGCGCTTCGAGCTGGGCCGCCACAAGCCGCTGGTGATGATGATTTCCGGCGTCAAT
GGCGCCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGCACATGCAGTCGAACAACCAGTCCGTGCTGCTGGCCGCGGG
CGACACCTTCCGCGCCGCCGCGCGCGAGCAGTTGATGGTCTGGGGCGAGCGCAACAACGTTACCGTGATTTCGCAAGAAT
CGGGCGACCCGGCCGCCGTGGCCTACGACTCCGTGCAATCGGCGAAGGCGCGCGGCATCGACGTGGTCATGGTCGACACG
GCCGGCCGCCTGCCGACCCAGTTGCACTTGATGGAAGAATTGAAGAAAATCAAGCGCGTGATCGGCAAGGGCATGGAGGG
CGCGCCGCATGAAACCCTGCTCGTCATCGACGGCAACACGGGTCAGAACGCCCTCACGCAAGTGAAGGCCTTCGACGATG
CCCTGCAGTTGAGCGGCCTGGTGATCACCAAGCTGGACGGTACCGCCAAGGGCGGGGTTCTGGCGGCGATTGCCCGCGTG
CGCCCCGTGCCCGTGTATTTCATCGGCATCGGTGAGAAAATTGAAGACTTGCAGCCCTTCGTGGCTGCCGAATTTGTCGA
AGCGCTGCTCGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
56.707 |
93.447 |
0.53 |