Detailed information NTG0320363

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4G81_RS07385
• Genome accession: NZ_CP032913
• Coordinates: 1513944..1515257 (-)
• Length: 437 a.a.
• NCBI ID: WP_201737675.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 5-A-EK1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1508944..1520257

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4G81_RS07355	nadC	1509409..1510230 (-)	822	WP_139524857.1	carboxylating nicotinate-nucleotide diphosphorylase	-
D4G81_RS07360	nadA	1510230..1511240 (-)	1011	WP_139524858.1	quinolinate synthase NadA	-
D4G81_RS07365	-	1511230..1512033 (-)	804	WP_139524859.1	phosphatidylserine decarboxylase	-
D4G81_RS07370	-	1512027..1512533 (-)	507	WP_000953088.1	hypothetical protein	-
D4G81_RS07375	-	1512546..1513040 (-)	495	WP_201737674.1	hypothetical protein	-
D4G81_RS07380	mqnP	1513033..1513917 (-)	885	WP_139524861.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4G81_RS07385	comEC/comE3	1513944..1515257 (-)	1314	WP_201737675.1	ComEC/Rec2 family competence protein	Machinery gene
D4G81_RS07390	-	1515254..1516720 (-)	1467	WP_139524862.1	replicative DNA helicase	-
D4G81_RS07395	-	1516731..1518131 (-)	1401	WP_139524863.1	NAD(P)H-hydrate dehydratase	-
D4G81_RS07400	crdS	1518134..1519336 (-)	1203	WP_139524864.1	copper-sensing histidine kinase CrdS	-
D4G81_RS07405	crdR	1519302..1519943 (-)	642	WP_139524865.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50161.12 Da
• Isoelectric Point: 9.8571

>NTDB_id=320363 D4G81_RS07385 WP_201737675.1 1513944..1515257(-) (comEC/comE3) [Helicobacter pylori strain 5-A-EK1]
MKDKTFQGAFELLTTPKEYLVCGVFLSLLLALNLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKACSFLESLRSCFFQTYSFSLTRKQDFKSHVRHSIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSVSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLVLACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKDSSFWMRSFQAIALS
VLVFLNMLIVAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLNMPLTIPTISIPSPLWLLGVHLLLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=320363 D4G81_RS07385 WP_201737675.1 1513944..1515257(-) (comEC/comE3) [Helicobacter pylori strain 5-A-EK1]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTACGACCCCCAAAGAATACCTGGTGTGTGGGGTGTTTTTAAG
CCTTTTGTTAGCGCTCAATCTTTATTTAGAATACTTGAATTATCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTATTACAATACCCTAAAACGAAAGATCAAAAAACCTATTTTGTCTTAAAACTCCAATCAAAGGGCATGATT
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCACGCGCAATTTTTTGGCAAAATCAAAGCTTGCTC
GTTTTTGGAGTCTTTAAGATCATGCTTTTTTCAAACCTATTCTTTTTCTTTAACACGAAAACAAGATTTTAAATCGCATG
TGCGCCATTCCATTGACAGCGCTCATTCAAGCGCTTTGGTGGGTAATTTGTATCGAGCGCTTTTTATAGGGGATAGCTTG
AATAAGGATTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGTTAGTGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTATTGCTGTTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGGTTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTACATCT
TTTTATTTTTAAAACACACTCAAATTTTTTTTAAAGATTCTTCTTTTTGGATGCGATCGTTTCAAGCGATCGCTTTAAGC
GTGTTGGTGTTTTTGAACATGCTCATTGTTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGCTTGTTTTTGCATGCGGTGGGTTTGGGGTCTTTGTTGGATCGCC
TTTTAAACATGCCTTTAACAATCCCTACGATTTCAATCCCTTCGCCTTTATGGCTTTTGGGGGTGCATTTACTTTTAACG
ATTTTAAGCGCGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTGAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-377)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	95.423	100	0.954