Detailed information NTG0320328

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4H18_RS00740
• Genome accession: NZ_CP032912
• Coordinates: 158745..160058 (+)
• Length: 437 a.a.
• NCBI ID: WP_201737563.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 13-A-EK8
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 153745..165058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4H18_RS00720	crdR	154059..154700 (+)	642	WP_139522442.1	copper response regulator transcription factor CrdR	-
D4H18_RS00725	crdS	154666..155868 (+)	1203	WP_139522443.1	copper-sensing histidine kinase CrdS	-
D4H18_RS00730	-	155871..157271 (+)	1401	WP_139522444.1	NAD(P)H-hydrate dehydratase	-
D4H18_RS00735	-	157282..158748 (+)	1467	WP_139522445.1	replicative DNA helicase	-
D4H18_RS00740	comEC/comE3	158745..160058 (+)	1314	WP_201737563.1	ComEC/Rec2 family competence protein	Machinery gene
D4H18_RS00745	mqnP	160129..160971 (+)	843	WP_236637722.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4H18_RS00750	-	160964..161458 (+)	495	WP_201737564.1	hypothetical protein	-
D4H18_RS00755	-	161471..161977 (+)	507	WP_000953105.1	hypothetical protein	-
D4H18_RS00760	-	161971..162774 (+)	804	WP_139522448.1	phosphatidylserine decarboxylase	-
D4H18_RS00765	nadA	162764..163774 (+)	1011	WP_139522449.1	quinolinate synthase NadA	-
D4H18_RS00770	nadC	163774..164595 (+)	822	WP_139522450.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50024.83 Da
• Isoelectric Point: 9.7356

>NTDB_id=320328 D4H18_RS00740 WP_201737563.1 158745..160058(+) (comEC/comE3) [Helicobacter pylori strain 13-A-EK8]
MKDKTFQGAFELLTTPKEYLWCGVVLSLLLAINLYLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMI
FYTTIKEPLKNLQYRHAQFFGKFKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWCHFIDGAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRILSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLSLKHTQAFFKTSSFLVRSFQVVSLS
ALVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDHILSMPLIIPTISVSSPLWLLGVHLFLT
ILSARSFKVYLSMNVLSVGFFLYCCYQYIIMPSSIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=320328 D4H18_RS00740 WP_201737563.1 158745..160058(+) (comEC/comE3) [Helicobacter pylori strain 13-A-EK8]
TTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTATGGTGTGGGGTTGTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAGCG
CTCAAATCTTGTTGCAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAACTCCAATCAAAAAACATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCACGCGCAATTTTTTGGCAAGTTCAAACCTTGCTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACCTATTCTTTTTCTTTAACGCGAAAACAGGATTTCAAATCGCATT
GGTGCCATTTCATTGACGGCGCTCATTCCAGCGCTTTGGTGGGTAATTTGTATCGAGCGCTTTTTATAGGGGATAGCTTG
AATAAGGATTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGATTCCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTACTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGATTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATCCTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGTGCGATCTTTTCAAGTCGTAAGCTTAAGC
GCGCTGGTGTTTTTGAACATGCTCATTATTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTTAGGGTCTTTATTGGATCATA
TTCTAAGCATGCCTTTAATAATCCCTACGATTTCGGTTTCTTCACCCTTATGGCTTTTAGGGGTGCATTTATTTTTAACG
ATTTTAAGTGCGCGTTCTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCGTAGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTCAATCGTGGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-402)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	94.737	100	0.947